Protein : Qrob_P0044090.2 Q. robur
Protein Identifier  ? Qrob_P0044090.2 Organism . Name  Quercus robur
Score  20.3 Score Type  egn
Protein Description  (M=1) KOG0195//KOG0507//KOG0509//KOG0510//KOG0512//KOG4177//KOG4412 - Integrin-linked kinase [Signal transduction mechanisms]. // CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]. // Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]. // Ankyrin repeat protein [General function prediction only]. // Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]. // Ankyrin [Cell wall/membrane/envelope biogenesis]. // 26S proteasome regulatory complex subunit PSMD10 [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 424  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_042938 7 412 + 406 Gaps:48 88.39 491 41.94 2e-91 Ankyrin repeat family protein
blastp_kegg lcl|mtr:MTR_8g073260 7 416 + 410 Gaps:27 93.56 450 40.62 7e-90 Ankyrin repeat protein
blastp_kegg lcl|tcc:TCM_042912 1 361 + 361 Gaps:32 80.75 452 46.03 1e-86 Ankyrin repeat-containing protein putative
blastp_kegg lcl|gmx:100777104 6 407 + 402 Gaps:30 97.12 416 39.85 8e-84 ankyrin repeat-containing protein At5g02620-like
blastp_kegg lcl|tcc:TCM_042910 5 331 + 327 Gaps:28 66.47 519 45.80 7e-83 Ankyrin repeat-containing protein
blastp_kegg lcl|tcc:TCM_042898 7 360 + 354 Gaps:42 76.42 492 44.15 2e-82 Ankyrin repeat-containing protein putative
blastp_kegg lcl|tcc:TCM_042924 6 407 + 402 Gaps:29 96.99 399 43.15 2e-82 Ankyrin repeat-containing protein putative
blastp_kegg lcl|pvu:PHAVU_009G085000g 12 387 + 376 Gaps:34 86.78 454 42.39 3e-82 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10028610mg 2 403 + 402 Gaps:36 80.41 490 43.91 5e-82 hypothetical protein
blastp_kegg lcl|tcc:TCM_042913 5 359 + 355 Gaps:16 79.87 452 43.49 8e-82 Ankyrin repeat-containing protein putative
blastp_pdb 1n11_A 36 236 + 201 Gaps:101 81.46 437 48.88 1e-10 mol:protein length:437 Ankyrin
blastp_pdb 1n0r_A 42 212 + 171 Gaps:20 97.62 126 52.85 3e-10 mol:protein length:126 4 ankyrin repeats
blastp_pdb 2qyj_A 6 240 + 235 Gaps:31 86.75 166 45.83 6e-09 mol:protein length:166 ankyrin NI3C
blastp_pdb 2xee_D 6 116 + 111 Gaps:5 67.52 157 34.91 7e-09 mol:protein length:157 NI3C DARPIN MUTANT5
blastp_pdb 2xee_C 6 116 + 111 Gaps:5 67.52 157 34.91 7e-09 mol:protein length:157 NI3C DARPIN MUTANT5
blastp_pdb 2xee_B 6 116 + 111 Gaps:5 67.52 157 34.91 7e-09 mol:protein length:157 NI3C DARPIN MUTANT5
blastp_pdb 2xee_A 6 116 + 111 Gaps:5 67.52 157 34.91 7e-09 mol:protein length:157 NI3C DARPIN MUTANT5
blastp_pdb 2xeh_C 6 116 + 111 Gaps:5 67.52 157 34.91 1e-08 mol:protein length:157 NI3C MUT6
blastp_pdb 2xeh_B 6 116 + 111 Gaps:5 67.52 157 34.91 1e-08 mol:protein length:157 NI3C MUT6
blastp_pdb 2xeh_A 6 116 + 111 Gaps:5 67.52 157 34.91 1e-08 mol:protein length:157 NI3C MUT6
blastp_uniprot_sprot sp|Q9ZU96|Y2168_ARATH 43 361 + 319 Gaps:65 60.53 532 27.95 1e-17 Ankyrin repeat-containing protein At2g01680 OS Arabidopsis thaliana GN At2g01680 PE 2 SV 1
blastp_uniprot_sprot sp|Q6AWW5|Y5262_ARATH 11 416 + 406 Gaps:76 82.82 524 24.19 2e-12 Ankyrin repeat-containing protein At5g02620 OS Arabidopsis thaliana GN At5g02620 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C7A2|Y3236_ARATH 43 306 + 264 Gaps:41 46.95 590 27.80 4e-12 Ankyrin repeat-containing protein At3g12360 OS Arabidopsis thaliana GN At3g12360 PE 2 SV 1
blastp_uniprot_sprot sp|Q02357|ANK1_MOUSE 36 256 + 221 Gaps:122 26.53 1862 45.75 1e-10 Ankyrin-1 OS Mus musculus GN Ank1 PE 1 SV 2
blastp_uniprot_sprot sp|P16157|ANK1_HUMAN 36 236 + 201 Gaps:122 27.96 1881 43.54 1e-09 Ankyrin-1 OS Homo sapiens GN ANK1 PE 1 SV 3
blastp_uniprot_sprot sp|Q5F478|ANR44_CHICK 22 222 + 201 Gaps:48 38.59 990 30.10 2e-09 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS Gallus gallus GN ANKRD44 PE 2 SV 1
blastp_uniprot_sprot sp|A5PMU4|ANS1B_DANRE 43 231 + 189 Gaps:19 13.59 1280 33.33 2e-09 Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS Danio rerio GN anks1b PE 3 SV 1
blastp_uniprot_sprot sp|Q02989|LITA_LATTR 42 223 + 182 Gaps:20 11.91 1411 31.55 5e-09 Alpha-latroinsectotoxin-Lt1a (Fragment) OS Latrodectus tredecimguttatus PE 1 SV 1
blastp_uniprot_sprot sp|Q502K3|ANR52_DANRE 8 219 + 212 Gaps:76 41.36 1071 28.22 2e-08 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS Danio rerio GN ankrd52 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Z2F6|BCL3_MOUSE 36 288 + 253 Gaps:37 55.80 448 26.80 2e-08 B-cell lymphoma 3 protein homolog OS Mus musculus GN Bcl3 PE 1 SV 2

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 284 301 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 6 423 418 PTHR24128:SF13 none none none
Pfam 10 95 86 PF12796 none Ankyrin repeats (3 copies) IPR020683
Pfam 138 219 82 PF12796 none Ankyrin repeats (3 copies) IPR020683
Phobius 1 283 283 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 359 364 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 188 217 30 SM00248 none ankyrin repeats IPR002110
SMART 39 68 30 SM00248 none ankyrin repeats IPR002110
SMART 107 138 32 SM00248 none ankyrin repeats IPR002110
SMART 73 102 30 SM00248 none ankyrin repeats IPR002110
SMART 142 174 33 SM00248 none ankyrin repeats IPR002110
Pfam 279 383 105 PF13962 none Domain of unknown function IPR026961
Gene3D 11 248 238 G3DSA:1.25.40.20 none none IPR020683
ProSiteProfiles 188 220 33 PS50088 none Ankyrin repeat profile. IPR002110
Phobius 365 385 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 73 100 28 PS50088 none Ankyrin repeat profile. IPR002110
Phobius 302 336 35 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 386 390 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 6 423 418 PTHR24128 none none none
PRINTS 40 55 16 PR01415 none Ankyrin repeat signature IPR002110
PRINTS 204 218 15 PR01415 none Ankyrin repeat signature IPR002110
ProSiteProfiles 39 247 209 PS50297 none Ankyrin repeat region circular profile. IPR020683
SUPERFAMILY 10 232 223 SSF48403 none none IPR020683
Phobius 337 358 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 413 423 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 391 412 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

4 Localization

Analysis Start End Length
TMHMM 390 412 22
TMHMM 285 307 22
TMHMM 337 359 22
TMHMM 366 385 19

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting