Protein : Qrob_P0044060.2 Q. robur
Protein Identifier  ? Qrob_P0044060.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR24420//PTHR24420:SF709 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE // SUBFAMILY NOT NAMED Alias (in v1)  Qrob_P0387270.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 457  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102628305 26 456 + 431 Gaps:5 87.80 492 80.09 0.0 protein TOO MANY MOUTHS-like
blastp_kegg lcl|cic:CICLE_v10018355mg 26 456 + 431 Gaps:5 87.10 496 80.09 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa024576mg 23 442 + 420 Gaps:8 93.42 456 76.76 0.0 hypothetical protein
blastp_kegg lcl|pmum:103328743 19 453 + 435 Gaps:8 94.23 468 74.38 0.0 protein TOO MANY MOUTHS
blastp_kegg lcl|pxb:103931750 24 456 + 433 Gaps:8 92.32 469 74.60 0.0 protein TOO MANY MOUTHS
blastp_kegg lcl|fve:101299409 34 456 + 423 Gaps:5 89.22 473 76.07 0.0 protein TOO MANY MOUTHS-like
blastp_kegg lcl|mdm:103405198 35 456 + 422 Gaps:4 90.45 471 73.94 0.0 protein TOO MANY MOUTHS-like
blastp_kegg lcl|mdm:103417260 35 456 + 422 Gaps:4 85.37 499 73.94 0.0 protein TOO MANY MOUTHS-like
blastp_kegg lcl|tcc:TCM_001820 24 453 + 430 Gaps:14 90.76 476 73.84 0.0 Receptor like protein 29
blastp_kegg lcl|vvi:100247105 35 454 + 420 Gaps:7 99.53 427 73.88 0.0 LRR receptor-like serine/threonine-protein kinase ERECTA-like
blastp_pdb 1ogq_A 37 392 + 356 Gaps:50 92.33 313 41.87 2e-27 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_pdb 3rgz_A 47 399 + 353 Gaps:200 92.45 768 48.17 6e-25 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 47 399 + 353 Gaps:200 92.45 768 48.17 6e-25 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rj0_A 47 399 + 353 Gaps:208 91.97 772 48.31 7e-25 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 47 399 + 353 Gaps:208 91.97 772 48.31 7e-25 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ozn_A 213 396 + 184 Gaps:2 64.56 285 30.98 3e-07 mol:protein length:285 Reticulon 4 receptor
blastp_pdb 1p8t_A 213 396 + 184 Gaps:2 64.56 285 30.98 3e-07 mol:protein length:285 Reticulon 4 receptor
blastp_pdb 3j0a_B 161 369 + 209 Gaps:58 29.98 844 29.25 3e-07 mol:protein length:844 Toll-like receptor 5
blastp_pdb 3j0a_A 161 369 + 209 Gaps:58 29.98 844 29.25 3e-07 mol:protein length:844 Toll-like receptor 5
blastp_pdb 2o6q_A 240 435 + 196 Gaps:47 84.81 270 30.13 4e-07 mol:protein length:270 Variable lymphocyte receptor A
blastp_uniprot_sprot sp|Q9SSD1|TMM_ARATH 37 434 + 398 Gaps:26 79.44 496 38.32 2e-63 Protein TOO MANY MOUTHS OS Arabidopsis thaliana GN TMM PE 2 SV 1
blastp_uniprot_sprot sp|Q5PP26|PII2_ARATH 22 412 + 391 Gaps:25 93.87 424 31.91 2e-47 Piriformospora indica-insensitive protein 2 OS Arabidopsis thaliana GN PII-2 PE 2 SV 1
blastp_uniprot_sprot sp|C0LGS2|Y4361_ARATH 102 421 + 320 Gaps:118 59.42 1136 54.52 1e-39 Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS Arabidopsis thaliana GN At4g36180 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHI2|Y1723_ARATH 102 396 + 295 Gaps:39 58.31 1101 49.53 1e-38 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS Arabidopsis thaliana GN At1g17230 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LHP4|RCH2_ARATH 101 392 + 292 Gaps:44 52.67 1141 54.58 3e-38 Receptor-like protein kinase 2 OS Arabidopsis thaliana GN RCH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q00874|DR100_ARATH 140 393 + 254 Gaps:4 69.35 372 35.27 4e-37 DNA-damage-repair/toleration protein DRT100 OS Arabidopsis thaliana GN DRT100 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C9H7|RLP12_ARATH 12 395 + 384 Gaps:138 88.31 847 34.22 1e-36 Receptor-like protein 12 OS Arabidopsis thaliana GN RLP12 PE 2 SV 2
blastp_uniprot_sprot sp|O82318|Y2579_ARATH 70 425 + 356 Gaps:138 58.96 960 46.64 2e-36 Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS Arabidopsis thaliana GN At2g25790 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FL28|FLS2_ARATH 101 438 + 338 Gaps:58 64.45 1173 53.31 7e-36 LRR receptor-like serine/threonine-protein kinase FLS2 OS Arabidopsis thaliana GN FLS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FRS6|PXL1_ARATH 101 396 + 296 Gaps:95 54.03 1029 47.30 1e-35 Leucine-rich repeat receptor-like protein kinase PXL1 OS Arabidopsis thaliana GN PXL1 PE 2 SV 1

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 239 296 58 PF13855 none Leucine rich repeat IPR001611
Pfam 166 225 60 PF13855 none Leucine rich repeat IPR001611
Pfam 310 369 60 PF13855 none Leucine rich repeat IPR001611
Phobius 20 27 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 35 91 57 PTHR24420:SF709 none none none
PANTHER 150 452 303 PTHR24420:SF709 none none none
Phobius 1 27 27 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 35 91 57 PTHR24420 none none none
PANTHER 150 452 303 PTHR24420 none none none
Phobius 28 431 404 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 136 400 265 G3DSA:3.80.10.10 none none none
Gene3D 61 77 17 G3DSA:3.80.10.10 none none none
Phobius 7 19 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 432 454 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 212 225 14 PR00019 none Leucine-rich repeat signature none
PRINTS 191 204 14 PR00019 none Leucine-rich repeat signature none
SMART 164 188 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 332 355 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 236 260 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 356 381 26 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 212 235 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SUPERFAMILY 98 399 302 SSF52058 none none none
Phobius 455 456 2 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

4 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 27 26
TMHMM 432 454 22
SignalP_EUK 1 27 26
SignalP_GRAM_NEGATIVE 1 27 26

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.892 0.058 NON-PLANT 27