Protein : Qrob_P0043290.2 Q. robur
Protein Identifier  ? Qrob_P0043290.2 Organism . Name  Quercus robur
Score  60.3 Score Type  egn
Protein Description  (M=2) PF00931//PF01582//PF03214 - NB-ARC domain // TIR domain // Reversibly glycosylated polypeptide Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1217  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0016866 intramolecular transferase activity Catalysis of the transfer of a functional group from one position to another within a single molecule.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103336011 10 747 + 738 Gaps:18 90.26 811 47.13 0.0 TMV resistance protein N-like
blastp_kegg lcl|gmx:100798893 10 1086 + 1077 Gaps:133 68.99 1464 41.29 0.0 TMV resistance protein N-like
blastp_kegg lcl|cam:101496656 10 977 + 968 Gaps:100 65.81 1404 42.75 0.0 TMV resistance protein N-like
blastp_kegg lcl|pmum:103327062 6 747 + 742 Gaps:18 79.91 921 46.47 0.0 TMV resistance protein N-like
blastp_kegg lcl|cam:101490798 10 984 + 975 Gaps:114 63.74 1470 42.37 0.0 TMV resistance protein N-like
blastp_kegg lcl|pper:PRUPE_ppa021703mg 10 1019 + 1010 Gaps:78 90.04 1104 41.15 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_011G030000g 10 1022 + 1013 Gaps:93 84.28 1132 40.04 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa025848mg 11 747 + 737 Gaps:19 84.88 860 45.89 0.0 hypothetical protein
blastp_kegg lcl|pmum:103322721 2 747 + 746 Gaps:20 84.67 874 45.81 0.0 TMV resistance protein N-like
blastp_kegg lcl|pmum:103322724 11 747 + 737 Gaps:18 84.12 869 46.79 0.0 TMV resistance protein N-like
blastp_pdb 3jrn_A 3 172 + 170 Gaps:4 95.45 176 46.43 6e-34 mol:protein length:176 AT1G72930 protein
blastp_pdb 3ozi_B 9 151 + 143 Gaps:3 69.61 204 39.44 4e-22 mol:protein length:204 L6tr
blastp_pdb 3ozi_A 9 151 + 143 Gaps:3 69.61 204 39.44 4e-22 mol:protein length:204 L6tr
blastp_pdb 1fyv_A 9 84 + 76 Gaps:2 47.20 161 36.84 8e-06 mol:protein length:161 TOLL-LIKE RECEPTOR 1
blastp_uniprot_sprot sp|Q40392|TMVRN_NICGU 10 907 + 898 Gaps:79 76.14 1144 36.17 1e-123 TMV resistance protein N OS Nicotiana glutinosa GN N PE 1 SV 1
blastp_uniprot_sprot sp|O23530|SNC1_ARATH 1 870 + 870 Gaps:79 82.17 1301 35.92 7e-111 Protein SUPPRESSOR OF npr1-1 CONSTITUTIVE 1 OS Arabidopsis thaliana GN SNC1 PE 1 SV 3
blastp_uniprot_sprot sp|O82500|Y4117_ARATH 2 737 + 736 Gaps:46 67.40 1095 36.59 9e-109 Putative disease resistance protein At4g11170 OS Arabidopsis thaliana GN At4g11170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL92|WRK16_ARATH 19 862 + 844 Gaps:148 55.39 1372 32.89 1e-67 Probable WRKY transcription factor 16 OS Arabidopsis thaliana GN WRKY16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZ67|WRK19_ARATH 8 747 + 740 Gaps:84 37.57 1895 32.58 2e-64 Probable WRKY transcription factor 19 OS Arabidopsis thaliana GN WRKY19 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FH83|WRK52_ARATH 19 883 + 865 Gaps:122 64.98 1288 32.26 4e-63 Probable WRKY transcription factor 52 OS Arabidopsis thaliana GN WRKY52 PE 2 SV 3
blastp_uniprot_sprot sp|Q9FKN7|DAR4_ARATH 19 865 + 847 Gaps:140 48.05 1613 30.45 6e-53 Protein DA1-related 4 OS Arabidopsis thaliana GN DAR4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SSN3|TIR_ARATH 3 172 + 170 Gaps:4 95.45 176 46.43 2e-33 Toll/interleukin-1 receptor-like protein OS Arabidopsis thaliana GN TIR PE 1 SV 1
blastp_uniprot_sprot sp|Q9SRT9|RGP1_ARATH 1132 1199 + 68 none 19.05 357 83.82 3e-29 UDP-arabinopyranose mutase 1 OS Arabidopsis thaliana GN RGP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8H8T0|RGP1_ORYSJ 1132 1199 + 68 none 18.68 364 82.35 4e-29 UDP-arabinopyranose mutase 1 OS Oryza sativa subsp. japonica GN UAM1 PE 1 SV 1
rpsblast_cdd gnl|CDD|178749 2 866 + 865 Gaps:68 73.81 1153 36.78 1e-131 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_cdd gnl|CDD|201512 196 466 + 271 Gaps:16 96.49 285 32.73 3e-38 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|201870 12 144 + 133 Gaps:2 100.00 135 47.41 1e-37 pfam01582 TIR TIR domain. The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88 interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn these associate with various kinases to set off signalling cascades.
rpsblast_cdd gnl|CDD|178722 1132 1199 + 68 none 19.65 346 83.82 1e-36 PLN03180 PLN03180 reversibly glycosylated polypeptide Provisional.
rpsblast_cdd gnl|CDD|197607 10 144 + 135 Gaps:3 95.71 140 44.03 3e-34 smart00255 TIR Toll - interleukin 1 - resistance.
rpsblast_cdd gnl|CDD|190568 1132 1199 + 68 none 19.54 348 72.06 4e-30 pfam03214 RGP Reversibly glycosylated polypeptide.

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 554 869 316 G3DSA:3.80.10.10 none none none
PRINTS 384 398 15 PR00364 none Disease resistance protein signature none
PRINTS 212 227 16 PR00364 none Disease resistance protein signature none
PRINTS 289 303 15 PR00364 none Disease resistance protein signature none
PRINTS 646 662 17 PR00364 none Disease resistance protein signature none
SUPERFAMILY 3 151 149 SSF52200 none none IPR000157
PANTHER 1 731 731 PTHR11017:SF146 none none none
PANTHER 818 895 78 PTHR11017:SF146 none none none
Pfam 12 144 133 PF01582 none TIR domain IPR000157
SUPERFAMILY 180 443 264 SSF52540 none none IPR027417
PANTHER 818 895 78 PTHR11017 none none none
ProSiteProfiles 8 149 142 PS50104 none TIR domain profile. IPR000157
Gene3D 194 366 173 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 490 505 16 SSF52058 none none none
SUPERFAMILY 556 883 328 SSF52058 none none none
PANTHER 1 731 731 PTHR11017 none none none
Pfam 1132 1201 70 PF03214 none Reversibly glycosylated polypeptide IPR004901
Gene3D 6 143 138 G3DSA:3.40.50.10140 none none IPR000157
Pfam 194 466 273 PF00931 none NB-ARC domain IPR002182
SMART 9 149 141 SM00255 none Toll - interleukin 1 - resistance IPR000157

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting