Protein : Qrob_P0043030.2 Q. robur
Protein Identifier  ? Qrob_P0043030.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PF00954//PF08276 - S-locus glycoprotein family // PAN-like domain Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 546  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_030879 42 524 + 483 Gaps:13 59.24 812 56.13 2e-132 Brassinosteroid insensitive 1-associated receptor kinase 1 precursor
blastp_kegg lcl|tcc:TCM_030878 42 524 + 483 Gaps:14 60.17 811 54.10 7e-129 Brassinosteroid insensitive 1-associated receptor kinase 1 precursor
blastp_kegg lcl|rcu:RCOM_1771080 47 516 + 470 Gaps:10 57.30 822 53.93 4e-125 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor putative (EC:2.7.11.25)
blastp_kegg lcl|tcc:TCM_030877 42 524 + 483 Gaps:15 61.08 812 52.42 9e-123 Brassinosteroid insensitive 1-associated receptor kinase 1 precursor
blastp_kegg lcl|pmum:103330554 47 527 + 481 Gaps:35 60.35 807 46.00 9e-89 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1
blastp_kegg lcl|pmum:103330553 47 527 + 481 Gaps:35 60.50 805 45.38 3e-86 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1
blastp_kegg lcl|pop:POPTR_0003s21910g 49 527 + 479 Gaps:37 60.56 791 43.22 6e-83 hypothetical protein
blastp_kegg lcl|pmum:103330557 47 527 + 481 Gaps:35 59.36 807 45.51 6e-81 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1
blastp_kegg lcl|tcc:TCM_040429 47 522 + 476 Gaps:42 58.45 799 43.25 6e-80 Receptor-like protein kinase 1 putative
blastp_kegg lcl|tcc:TCM_040439 47 527 + 481 Gaps:34 58.96 804 42.41 3e-79 Receptor protein kinase 1
blastp_uniprot_sprot sp|Q39202|RLK1_ARATH 46 536 + 491 Gaps:36 56.97 832 37.13 7e-33 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS Arabidopsis thaliana GN RLK1 PE 2 SV 2
blastp_uniprot_sprot sp|P17801|KPRO_MAIZE 138 425 + 288 Gaps:52 35.50 817 30.00 9e-15 Putative receptor protein kinase ZmPK1 OS Zea mays GN PK1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FLV4|Y5248_ARATH 59 522 + 464 Gaps:53 52.98 872 25.76 8e-14 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS Arabidopsis thaliana GN At5g24080 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XID3|Y1343_ARATH 120 543 + 424 Gaps:50 45.24 829 30.67 7e-13 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS Arabidopsis thaliana GN At1g34300 PE 1 SV 1
blastp_uniprot_sprot sp|P93756|SD31_ARATH 447 523 + 77 none 10.08 764 36.36 9e-09 G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 OS Arabidopsis thaliana GN SD31 PE 3 SV 1
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 435 522 + 88 Gaps:3 10.99 828 35.16 7e-07 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|Q39203|SD22_ARATH 159 451 + 293 Gaps:64 30.49 797 30.04 5e-06 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS Arabidopsis thaliana GN SD22 PE 1 SV 1
rpsblast_kog gnl|CDD|36401 435 518 + 84 Gaps:3 24.10 361 33.33 2e-09 KOG1187 KOG1187 KOG1187 Serine/threonine protein kinase [Signal transduction mechanisms].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 324 417 94 G3DSA:2.60.120.200 none none IPR013320
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 244 296 53 PF08276 none PAN-like domain IPR013227
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 435 522 88 PTHR24420 none none none
Gene3D 418 452 35 G3DSA:3.30.200.20 none none none
Pfam 131 208 78 PF00954 none S-locus glycoprotein family IPR000858
PANTHER 435 522 88 PTHR24420:SF583 none none none
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 22 25 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 374 545 172 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 26 345 320 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 346 373 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 384 439 56 SSF56112 none none IPR011009

4 Localization

Analysis Start End Length
SignalP_EUK 1 25 24
TMHMM 351 373 22
SignalP_GRAM_POSITIVE 1 25 24
TMHMM 7 29 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 1 0.983 0.013 NON-PLANT 25