Protein : Qrob_P0042890.2 Q. robur
Protein Identifier  ? Qrob_P0042890.2 Organism . Name  Quercus robur
Score  65.2 Score Type  egn
Protein Description  (M=6) 3.2.1.52 - Beta-N-acetylhexosaminidase. Code Enzyme  EC:3.2.1.52
Gene Prediction Quality  validated Protein length 

Sequence

Length: 930  
Kegg Orthology  K12373
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0004563 beta-N-acetylhexosaminidase activity Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100240836 30 586 + 557 Gaps:12 94.62 576 81.47 0.0 beta-hexosaminidase-like
blastp_kegg lcl|mdm:103413648 9 584 + 576 Gaps:15 88.43 648 76.44 0.0 beta-hexosaminidase 2
blastp_kegg lcl|pxb:103954935 9 583 + 575 Gaps:17 87.90 653 76.48 0.0 beta-hexosaminidase 2
blastp_kegg lcl|pmum:103330572 8 582 + 575 Gaps:13 95.96 594 76.32 0.0 beta-hexosaminidase 2
blastp_kegg lcl|fve:101307023 5 584 + 580 Gaps:17 99.48 574 76.71 0.0 beta-hexosaminidase 2-like
blastp_kegg lcl|pper:PRUPE_ppa002753mg 30 587 + 558 Gaps:13 86.81 637 77.94 0.0 hypothetical protein
blastp_kegg lcl|cmo:103503058 22 584 + 563 Gaps:10 90.95 608 76.85 0.0 beta-hexosaminidase 2
blastp_kegg lcl|tcc:TCM_025953 4 584 + 581 Gaps:12 95.82 598 75.92 0.0 Beta-hexosaminidase 2
blastp_kegg lcl|csv:101227397 22 584 + 563 Gaps:10 91.10 607 76.85 0.0 beta-hexosaminidase 2-like
blastp_kegg lcl|pop:POPTR_0001s23930g 32 585 + 554 Gaps:13 93.99 582 78.24 0.0 glycosyl hydrolase family 20 family protein
blastp_pdb 3ozp_A 41 580 + 540 Gaps:77 92.13 572 35.48 2e-82 mol:protein length:572 N-acetylglucosaminidase
blastp_pdb 3ozo_A 41 580 + 540 Gaps:77 92.13 572 35.48 2e-82 mol:protein length:572 N-acetylglucosaminidase
blastp_pdb 3nsn_A 41 580 + 540 Gaps:77 92.13 572 35.48 2e-82 mol:protein length:572 N-acetylglucosaminidase
blastp_pdb 3nsm_A 41 580 + 540 Gaps:77 92.13 572 35.48 2e-82 mol:protein length:572 N-acetylglucosaminidase
blastp_pdb 3s6t_A 116 580 + 465 Gaps:51 77.57 575 37.89 3e-82 mol:protein length:575 N-acetylglucosaminidase
blastp_pdb 2gk1_H 32 573 + 542 Gaps:76 98.61 503 35.89 9e-76 mol:protein length:503 Beta-hexosaminidase beta chain
blastp_pdb 2gk1_F 32 573 + 542 Gaps:76 98.61 503 35.89 9e-76 mol:protein length:503 Beta-hexosaminidase beta chain
blastp_pdb 2gk1_D 32 573 + 542 Gaps:76 98.61 503 35.89 9e-76 mol:protein length:503 Beta-hexosaminidase beta chain
blastp_pdb 2gk1_B 32 573 + 542 Gaps:76 98.61 503 35.89 9e-76 mol:protein length:503 Beta-hexosaminidase beta chain
blastp_pdb 2gjx_G 32 573 + 542 Gaps:76 97.83 507 35.89 9e-76 mol:protein length:507 Beta-hexosaminidase beta chain
blastp_uniprot_sprot sp|Q9SYK0|HEXO2_ARATH 1 584 + 584 Gaps:21 98.79 580 67.71 0.0 Beta-hexosaminidase 2 OS Arabidopsis thaliana GN HEXO2 PE 1 SV 1
blastp_uniprot_sprot sp|P43077|HEX1_CANAX 28 581 + 554 Gaps:48 94.66 562 40.04 7e-109 Beta-hexosaminidase OS Candida albicans GN HEX1 PE 1 SV 1
blastp_uniprot_sprot sp|P49010|HEXC_BOMMO 55 580 + 526 Gaps:60 84.23 596 34.46 1e-79 Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS Bombyx mori PE 1 SV 1
blastp_uniprot_sprot sp|P49614|HEXB_FELCA 22 573 + 552 Gaps:90 95.29 531 37.94 2e-76 Beta-hexosaminidase subunit beta OS Felis catus GN HEXB PE 2 SV 2
blastp_uniprot_sprot sp|P07686|HEXB_HUMAN 10 573 + 564 Gaps:77 92.99 556 35.20 4e-75 Beta-hexosaminidase subunit beta OS Homo sapiens GN HEXB PE 1 SV 3
blastp_uniprot_sprot sp|Q8WSF3|FDL_DROME 77 580 + 504 Gaps:68 74.55 660 34.96 3e-71 Probable beta-hexosaminidase fdl OS Drosophila melanogaster GN fdl PE 1 SV 1
blastp_uniprot_sprot sp|P20060|HEXB_MOUSE 32 573 + 542 Gaps:94 92.54 536 36.09 4e-71 Beta-hexosaminidase subunit beta OS Mus musculus GN Hexb PE 2 SV 2
blastp_uniprot_sprot sp|Q6AXR4|HEXB_RAT 32 573 + 542 Gaps:92 92.36 537 36.29 6e-70 Beta-hexosaminidase subunit beta OS Rattus norvegicus GN Hexb PE 2 SV 1
blastp_uniprot_sprot sp|Q641X3|HEXA_RAT 33 573 + 541 Gaps:97 94.32 528 36.14 2e-68 Beta-hexosaminidase subunit alpha OS Rattus norvegicus GN Hexa PE 2 SV 1
blastp_uniprot_sprot sp|P13723|HEXA1_DICDI 42 599 + 558 Gaps:88 95.11 532 33.99 3e-68 Beta-hexosaminidase subunit A1 OS Dictyostelium discoideum GN hexa1 PE 1 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 170 534 365 PF00728 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20, catalytic domain IPR015883
Pfam 32 150 119 PF14845 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" beta-acetyl hexosaminidase like IPR029019
PANTHER 6 642 637 PTHR22600:SF4 none none none
SUPERFAMILY 32 168 137 SSF55545 none none IPR029018
Phobius 22 25 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 28 156 129 G3DSA:3.30.379.10 none none IPR029018
Phobius 26 929 904 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 6 642 637 PTHR22600 none none none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 168 584 417 G3DSA:3.20.20.80 none none IPR013781
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 170 551 382 SSF51445 none none IPR017853
PRINTS 130 150 21 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 193 214 22 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 247 264 18 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 499 515 17 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 516 533 18 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 303 321 19 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 164 181 18 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 325 338 14 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705

1 Localization

Analysis Start End Length
SignalP_EUK 1 25 24

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 1 0.981 0.051 NON-PLANT 25