Protein : Qrob_P0042730.2 Q. robur
Protein Identifier  ? Qrob_P0042730.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=35) PF14368 - Probable lipid transfer Gene Prediction Quality  validated
Protein length 

Sequence

Length: 113  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0001s23850g 6 112 + 107 Gaps:1 86.40 125 75.00 1e-47 hypothetical protein
blastp_kegg lcl|mdm:103441091 10 112 + 103 none 52.02 198 71.84 1e-45 protein YLS3-like
blastp_kegg lcl|pxb:103945925 10 112 + 103 none 69.13 149 70.87 2e-45 protein YLS3-like
blastp_kegg lcl|cit:102621405 11 112 + 102 none 64.15 159 71.57 8e-44 protein YLS3-like
blastp_kegg lcl|rcu:RCOM_1776500 22 112 + 91 none 68.42 133 75.82 2e-43 lipid binding protein putative
blastp_kegg lcl|cic:CICLE_v10033694mg 11 112 + 102 none 49.76 205 70.59 7e-42 hypothetical protein
blastp_kegg lcl|tcc:TCM_005951 22 112 + 91 none 51.41 177 75.82 2e-41 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
blastp_kegg lcl|vvi:100254566 14 112 + 99 none 52.66 188 67.68 7e-41 uncharacterized LOC100254566
blastp_kegg lcl|pmum:103330576 28 112 + 85 none 44.50 191 77.65 7e-40 protein YLS3-like
blastp_kegg lcl|gmx:100792950 8 112 + 105 Gaps:1 54.36 195 63.21 4e-39 uncharacterized LOC100792950
blastp_uniprot_sprot sp|O64864|YLS3_ARATH 12 112 + 101 Gaps:2 48.29 205 63.64 3e-38 Protein YLS3 OS Arabidopsis thaliana GN YLS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYI9|NLTL5_ARATH 23 109 + 87 Gaps:6 48.90 182 37.08 2e-10 Non-specific lipid-transfer protein-like protein At5g64080 OS Arabidopsis thaliana GN At5g64080 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZQI8|NLTL2_ARATH 36 112 + 77 Gaps:4 45.56 169 36.36 7e-08 Non-specific lipid-transfer protein-like protein At2g13820 OS Arabidopsis thaliana GN At2g13820 PE 1 SV 1
blastp_uniprot_sprot sp|P27056|NLTP1_SOLLC 11 112 + 102 Gaps:17 86.84 114 34.34 8e-06 Non-specific lipid-transfer protein 1 OS Solanum lycopersicum GN TSW12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFY3|VAS_ARATH 11 105 + 95 Gaps:6 60.26 151 36.26 1e-05 Lipid transfer-like protein VAS OS Arabidopsis thaliana GN VAS PE 2 SV 1
rpsblast_cdd gnl|CDD|72935 44 106 + 63 Gaps:1 98.41 63 50.00 1e-09 cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI) Lipid Transfer (LT) and Seed Storage (SS) Protein family a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors lipid transfer proteins seed storage proteins and similar proteins. Proteins in this family are known to play important roles in defending plants from insects and pathogens lipid transport between intracellular membranes and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges..

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 92 109 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 57 71 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 36 52 17 PR00382 none Plant phospholipid transfer protein signature IPR000528
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 36 110 75 SSF47699 none none IPR016140
Phobius 4 16 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 17 28 12 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 29 112 84 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 20 110 91 PF14368 none Probable lipid transfer IPR016140
Gene3D 36 110 75 G3DSA:1.10.110.10 none none none

3 Localization

Analysis Start End Length
SignalP_EUK 1 28 27
SignalP_GRAM_POSITIVE 1 30 29
TMHMM 4 26 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting