Protein : Qrob_P0041320.2 Q. robur
Protein Identifier  ? Qrob_P0041320.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG0075//KOG0077 - GTP-binding ADP-ribosylation factor-like protein [General function prediction only]. // Vesicle coat complex COPII GTPase subunit SAR1 [Intracellular trafficking secretion and vesicular transport]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 234  
Kegg Orthology  K07953
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103930569 59 233 + 175 Gaps:4 90.67 193 45.14 2e-35 GTP-binding protein SAR1A-like
blastp_kegg lcl|mdm:103433877 59 233 + 175 Gaps:4 90.67 193 45.14 2e-35 GTP-binding protein SAR1A
blastp_kegg lcl|pxb:103962305 59 233 + 175 Gaps:4 90.67 193 44.57 3e-35 GTP-binding protein SAR1A-like
blastp_kegg lcl|aly:ARALYDRAFT_907829 59 232 + 174 Gaps:4 90.16 193 44.25 5e-35 Os01g0254000
blastp_kegg lcl|obr:102719622 59 233 + 175 Gaps:4 90.67 193 44.00 6e-35 GTP-binding protein SAR1A-like
blastp_kegg lcl|cmo:103492761 59 233 + 175 Gaps:4 90.67 193 44.57 7e-35 GTP-binding protein SAR1A
blastp_kegg lcl|fve:101301011 59 233 + 175 Gaps:4 90.67 193 44.57 9e-35 GTP-binding protein SAR1A-like
blastp_kegg lcl|mdm:103449219 59 233 + 175 Gaps:4 90.67 193 44.57 1e-34 GTP-binding protein SAR1B
blastp_kegg lcl|gmx:100788066 59 233 + 175 Gaps:4 90.67 193 44.00 1e-34 GTP-binding protein SAR1A-like
blastp_kegg lcl|csv:101221276 59 233 + 175 Gaps:4 90.67 193 44.00 2e-34 GTP-binding protein SAR1A-like
blastp_pdb 1f6b_B 52 232 + 181 Gaps:8 91.41 198 33.70 4e-25 mol:protein length:198 SAR1
blastp_pdb 1f6b_A 52 232 + 181 Gaps:8 91.41 198 33.70 4e-25 mol:protein length:198 SAR1
blastp_pdb 2fmx_B 52 232 + 181 Gaps:8 92.82 195 33.70 6e-25 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fmx_A 52 232 + 181 Gaps:8 92.82 195 33.70 6e-25 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fa9_B 52 232 + 181 Gaps:8 95.77 189 33.70 6e-25 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2fa9_A 52 232 + 181 Gaps:8 95.77 189 33.70 6e-25 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2gao_B 52 232 + 181 Gaps:10 87.02 208 34.25 1e-23 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2gao_A 52 232 + 181 Gaps:10 87.02 208 34.25 1e-23 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 1m2o_D 59 232 + 174 Gaps:9 88.95 190 37.28 3e-21 mol:protein length:190 GTP-binding protein SAR1
blastp_pdb 1m2o_B 59 232 + 174 Gaps:9 88.95 190 37.28 3e-21 mol:protein length:190 GTP-binding protein SAR1
blastp_uniprot_sprot sp|O04266|SAR1A_BRACM 59 233 + 175 Gaps:4 90.67 193 44.00 6e-36 GTP-binding protein SAR1A OS Brassica campestris GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|P52884|SAR2_SOLLC 59 233 + 175 Gaps:4 90.67 193 43.43 2e-35 GTP-binding protein SAR2 OS Solanum lycopersicum GN SAR2 PE 2 SV 1
blastp_uniprot_sprot sp|O04834|SAR1A_ARATH 59 233 + 175 Gaps:4 90.67 193 42.29 5e-34 GTP-binding protein SAR1A OS Arabidopsis thaliana GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|O04267|SAR1B_BRACM 59 232 + 174 Gaps:4 90.26 195 42.61 6e-34 GTP-binding protein SAR1B OS Brassica campestris GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|Q01474|SAR1B_ARATH 59 232 + 174 Gaps:4 90.16 193 43.10 1e-33 GTP-binding protein SAR1B OS Arabidopsis thaliana GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|P78976|SAR1_HYPJE 59 232 + 174 Gaps:7 90.48 189 38.01 6e-27 Small COPII coat GTPase sar1 OS Hypocrea jecorina GN sar1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6CB54|SAR1_YARLI 59 232 + 174 Gaps:10 90.53 190 40.12 8e-27 Small COPII coat GTPase SAR1 OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CT17|SAR1_MAGOY 59 232 + 174 Gaps:7 90.48 189 38.01 3e-26 Small COPII coat GTPase SAR1 OS Magnaporthe oryzae (strain Y34) GN SAR1 PE 2 SV 1
blastp_uniprot_sprot sp|P0CT16|SAR1_MAGO7 59 232 + 174 Gaps:7 90.48 189 38.01 3e-26 Small COPII coat GTPase SAR1 OS Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|P0C583|SAR1_NEUCR 59 232 + 174 Gaps:7 90.48 189 38.60 5e-26 Small COPII coat GTPase sar1 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN vtr-7 PE 3 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 41 232 192 SM00178 none Sar1p-like members of the Ras-family of small GTPases IPR006687
Phobius 20 41 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 59 232 174 PF00025 none ADP-ribosylation factor family IPR006689
SUPERFAMILY 63 168 106 SSF52540 none none IPR027417
PRINTS 116 141 26 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 62 85 24 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 206 230 25 PR00328 none GTP-binding SAR1 protein signature IPR006689
PANTHER 99 233 135 PTHR11711 none none none
Gene3D 62 168 107 G3DSA:3.40.50.300 none none IPR027417
ProSiteProfiles 54 232 179 PS51422 none small GTPase SAR1 family profile. IPR006687
PANTHER 99 233 135 PTHR11711:SF12 none none IPR006687
Phobius 42 233 192 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 19 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 42   Secretory pathway 1 0.991 0.013 NON-PLANT 42