Protein : Qrob_P0041300.2 Q. robur
Protein Identifier  ? Qrob_P0041300.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=1) KOG0070//KOG0071//KOG0073//KOG0074//KOG0075//KOG0077 - GTP-binding ADP-ribosylation factor Arf1 [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor Arf6 (dArf3) [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor-like protein ARL2 [Intracellular trafficking secretion and vesicular transport Cytoskeleton]. // GTP-binding ADP-ribosylation factor-like protein ARL3 [General function prediction only]. // GTP-binding ADP-ribosylation factor-like protein [General function prediction only]. // Vesicle coat complex COPII GTPase subunit SAR1 [Intracellular trafficking secretion and vesicular transport]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 238  
Kegg Orthology  K07953
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa011838mg 58 234 + 177 Gaps:2 90.67 193 53.71 2e-47 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10022379mg 58 234 + 177 Gaps:2 90.67 193 53.14 5e-47 hypothetical protein
blastp_kegg lcl|cit:102626272 58 234 + 177 Gaps:2 90.67 193 53.14 5e-47 GTP-binding protein SAR1A-like
blastp_kegg lcl|pmum:103334046 58 234 + 177 Gaps:2 90.67 193 53.14 7e-47 GTP-binding protein SAR1A-like
blastp_kegg lcl|pper:PRUPE_ppa011842mg 58 234 + 177 Gaps:2 90.67 193 53.14 1e-46 hypothetical protein
blastp_kegg lcl|pmum:103344024 58 234 + 177 Gaps:2 90.67 193 53.14 2e-46 GTP-binding protein SAR1A-like
blastp_kegg lcl|mdm:103449219 58 234 + 177 Gaps:2 90.67 193 53.14 2e-46 GTP-binding protein SAR1B
blastp_kegg lcl|mus:103972399 58 234 + 177 Gaps:2 90.67 193 51.43 2e-46 GTP-binding protein SAR1A-like
blastp_kegg lcl|mus:103969355 58 234 + 177 Gaps:2 90.67 193 52.00 2e-46 GTP-binding protein SAR1A-like
blastp_kegg lcl|vvi:100248702 58 234 + 177 Gaps:2 90.67 193 52.57 2e-46 GTP-binding protein SAR1A-like
blastp_pdb 1f6b_B 51 226 + 176 Gaps:2 87.88 198 38.51 2e-33 mol:protein length:198 SAR1
blastp_pdb 1f6b_A 51 226 + 176 Gaps:2 87.88 198 38.51 2e-33 mol:protein length:198 SAR1
blastp_pdb 2fmx_B 51 226 + 176 Gaps:2 89.23 195 38.51 3e-33 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fmx_A 51 226 + 176 Gaps:2 89.23 195 38.51 3e-33 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fa9_B 51 226 + 176 Gaps:2 92.06 189 37.93 8e-32 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2fa9_A 51 226 + 176 Gaps:2 92.06 189 37.93 8e-32 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2gao_B 51 231 + 181 Gaps:2 86.06 208 36.87 3e-31 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2gao_A 51 231 + 181 Gaps:2 86.06 208 36.87 3e-31 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 1m2o_D 58 231 + 174 Gaps:7 87.89 190 38.92 8e-24 mol:protein length:190 GTP-binding protein SAR1
blastp_pdb 1m2o_B 58 231 + 174 Gaps:7 87.89 190 38.92 8e-24 mol:protein length:190 GTP-binding protein SAR1
blastp_uniprot_sprot sp|P52884|SAR2_SOLLC 58 234 + 177 Gaps:2 90.67 193 49.71 3e-45 GTP-binding protein SAR2 OS Solanum lycopersicum GN SAR2 PE 2 SV 1
blastp_uniprot_sprot sp|O04834|SAR1A_ARATH 58 234 + 177 Gaps:2 90.67 193 49.71 1e-44 GTP-binding protein SAR1A OS Arabidopsis thaliana GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|O04266|SAR1A_BRACM 58 234 + 177 Gaps:2 90.67 193 50.29 1e-44 GTP-binding protein SAR1A OS Brassica campestris GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|Q01474|SAR1B_ARATH 58 234 + 177 Gaps:2 90.67 193 50.29 4e-44 GTP-binding protein SAR1B OS Arabidopsis thaliana GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|O04267|SAR1B_BRACM 41 234 + 194 Gaps:10 98.46 195 47.92 9e-42 GTP-binding protein SAR1B OS Brassica campestris GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|Q9QVY3|SAR1B_CRIGR 51 226 + 176 Gaps:2 87.88 198 38.51 8e-33 GTP-binding protein SAR1b OS Cricetulus griseus GN SAR1B PE 1 SV 1
blastp_uniprot_sprot sp|Q5PYH3|SAR1B_PIG 51 226 + 176 Gaps:2 87.88 198 38.51 9e-33 GTP-binding protein SAR1b OS Sus scrofa GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|Q5HZY2|SAR1B_RAT 51 226 + 176 Gaps:2 87.88 198 38.51 9e-33 GTP-binding protein SAR1b OS Rattus norvegicus GN Sar1b PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y6B6|SAR1B_HUMAN 51 226 + 176 Gaps:2 87.88 198 37.93 1e-32 GTP-binding protein SAR1b OS Homo sapiens GN SAR1B PE 1 SV 1
blastp_uniprot_sprot sp|Q3T0T7|SAR1B_BOVIN 51 226 + 176 Gaps:2 87.88 198 38.51 1e-32 GTP-binding protein SAR1b OS Bos taurus GN SAR1B PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 5 236 232 PTHR11711:SF12 none none IPR006687
Gene3D 55 225 171 G3DSA:3.40.50.300 none none IPR027417
PANTHER 5 236 232 PTHR11711 none none none
SUPERFAMILY 56 169 114 SSF52540 none none IPR027417
SMART 41 233 193 SM00178 none Sar1p-like members of the Ras-family of small GTPases IPR006687
Phobius 46 237 192 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 58 231 174 PF00025 none ADP-ribosylation factor family IPR006689
Phobius 1 19 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 53 233 181 PS51422 none small GTPase SAR1 family profile. IPR006687
Phobius 20 45 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 89 113 25 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 116 141 26 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 207 231 25 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 61 84 24 PR00328 none GTP-binding SAR1 protein signature IPR006689

1 Localization

Analysis Start End Length
TMHMM 25 47 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 42   Secretory pathway 1 0.983 0.019 NON-PLANT 42