Protein : Qrob_P0041260.2 Q. robur
Protein Identifier  ? Qrob_P0041260.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=10) K07953 - GTP-binding protein SAR1 [EC:3.6.5.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 210  
Kegg Orthology  K07953
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10022379mg 32 209 + 178 Gaps:22 90.16 193 44.83 2e-29 hypothetical protein
blastp_kegg lcl|cit:102626272 32 209 + 178 Gaps:22 90.16 193 44.83 2e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|zma:100283241 32 209 + 178 Gaps:22 90.16 193 44.25 3e-29 GTP-binding protein SAR1A
blastp_kegg lcl|pxb:103967165 32 209 + 178 Gaps:22 90.16 193 44.83 4e-29 GTP-binding protein SAR1A
blastp_kegg lcl|vvi:100240934 32 209 + 178 Gaps:26 90.16 193 44.83 5e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|pper:PRUPE_ppa011838mg 32 209 + 178 Gaps:22 90.16 193 44.83 7e-29 hypothetical protein
blastp_kegg lcl|vvi:100248702 32 209 + 178 Gaps:22 90.16 193 44.25 8e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|obr:102719622 32 209 + 178 Gaps:26 90.16 193 43.10 8e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|rcu:RCOM_0999880 32 209 + 178 Gaps:22 90.16 193 44.25 1e-28 GTP-binding protein sar1 putative
blastp_kegg lcl|fve:101301011 32 209 + 178 Gaps:22 90.16 193 44.83 1e-28 GTP-binding protein SAR1A-like
blastp_pdb 2fmx_B 67 209 + 143 Gaps:21 67.69 195 35.61 3e-13 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fmx_A 67 209 + 143 Gaps:21 67.69 195 35.61 3e-13 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fa9_B 67 209 + 143 Gaps:21 69.84 189 35.61 3e-13 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2fa9_A 67 209 + 143 Gaps:21 69.84 189 35.61 3e-13 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 1f6b_B 67 209 + 143 Gaps:21 66.67 198 35.61 4e-13 mol:protein length:198 SAR1
blastp_pdb 1f6b_A 67 209 + 143 Gaps:21 66.67 198 35.61 4e-13 mol:protein length:198 SAR1
blastp_pdb 2gao_B 67 209 + 143 Gaps:19 63.46 208 36.36 4e-13 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2gao_A 67 209 + 143 Gaps:19 63.46 208 36.36 4e-13 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 1m2o_D 32 209 + 178 Gaps:25 88.95 190 31.95 2e-10 mol:protein length:190 GTP-binding protein SAR1
blastp_pdb 1m2o_B 32 209 + 178 Gaps:25 88.95 190 31.95 2e-10 mol:protein length:190 GTP-binding protein SAR1
blastp_uniprot_sprot sp|O04267|SAR1B_BRACM 32 209 + 178 Gaps:24 90.26 195 42.61 4e-29 GTP-binding protein SAR1B OS Brassica campestris GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|Q01474|SAR1B_ARATH 32 209 + 178 Gaps:26 90.16 193 44.25 7e-29 GTP-binding protein SAR1B OS Arabidopsis thaliana GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|O04834|SAR1A_ARATH 32 209 + 178 Gaps:22 90.16 193 43.10 2e-28 GTP-binding protein SAR1A OS Arabidopsis thaliana GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|P52884|SAR2_SOLLC 32 209 + 178 Gaps:26 90.16 193 41.95 3e-28 GTP-binding protein SAR2 OS Solanum lycopersicum GN SAR2 PE 2 SV 1
blastp_uniprot_sprot sp|O04266|SAR1A_BRACM 32 209 + 178 Gaps:22 90.16 193 43.10 6e-28 GTP-binding protein SAR1A OS Brassica campestris GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|P52885|SAR1_TOBAC 32 209 + 178 Gaps:27 90.40 198 37.43 1e-18 GTP-binding protein SAR1 OS Nicotiana tabacum GN SAR1 PE 2 SV 1
blastp_uniprot_sprot sp|P0CR30|SAR1_CRYNJ 32 209 + 178 Gaps:25 90.48 189 35.67 6e-16 Small COPII coat GTPase SAR1 OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CR31|SAR1_CRYNB 32 209 + 178 Gaps:25 90.48 189 35.67 6e-16 Small COPII coat GTPase SAR1 OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6BVA7|SAR1_DEBHA 32 209 + 178 Gaps:22 90.53 190 33.14 3e-15 Small COPII coat GTPase SAR1 OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q559R0|SAR1A_DICDI 32 209 + 178 Gaps:28 90.43 188 31.18 1e-14 GTP-binding protein Sar1A OS Dictyostelium discoideum GN sarA PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 18 209 192 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 11 209 199 SM00178 none Sar1p-like members of the Ras-family of small GTPases IPR006687
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 67 209 143 G3DSA:3.40.50.300 none none IPR027417
Phobius 12 17 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 3 11 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 67 209 143 PF00025 none ADP-ribosylation factor family IPR006689
PANTHER 66 209 144 PTHR11711:SF12 none none IPR006687
PANTHER 66 209 144 PTHR11711 none none none
PRINTS 35 58 24 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 140 161 22 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 183 207 25 PR00328 none GTP-binding SAR1 protein signature IPR006689

1 Localization

Analysis Start End Length
SignalP_EUK 1 24 23

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 1 0.948 0.085 NON-PLANT 24