Protein : Qrob_P0041250.2 Q. robur
Protein Identifier  ? Qrob_P0041250.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0070//KOG0071//KOG0072//KOG0073//KOG0075//KOG0076//KOG0077 - GTP-binding ADP-ribosylation factor Arf1 [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor Arf6 (dArf3) [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor-like protein ARL1 [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor-like protein ARL2 [Intracellular trafficking secretion and vesicular transport Cytoskeleton]. // GTP-binding ADP-ribosylation factor-like protein [General function prediction only]. // GTP-binding ADP-ribosylation factor-like protein yARL3 [Intracellular trafficking secretion and vesicular transport]. // Vesicle coat complex COPII GTPase subunit SAR1 [Intracellular trafficking secretion and vesicular transport]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 110  
Kegg Orthology  K07953
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100248702 3 109 + 107 none 55.44 193 98.13 3e-70 GTP-binding protein SAR1A-like
blastp_kegg lcl|rcu:RCOM_1347400 3 109 + 107 none 55.44 193 97.20 2e-69 GTP-binding protein sar1 putative
blastp_kegg lcl|vvi:100240934 3 109 + 107 none 55.44 193 97.20 2e-69 GTP-binding protein SAR1A-like
blastp_kegg lcl|tcc:TCM_004790 1 109 + 109 none 41.13 265 96.33 2e-69 Secretion-associated RAS super family 2 isoform 1
blastp_kegg lcl|cmo:103492761 3 109 + 107 none 55.44 193 96.26 2e-69 GTP-binding protein SAR1A
blastp_kegg lcl|fve:101301011 3 109 + 107 none 55.44 193 97.20 2e-69 GTP-binding protein SAR1A-like
blastp_kegg lcl|pmum:103334046 3 109 + 107 none 55.44 193 98.13 3e-69 GTP-binding protein SAR1A-like
blastp_kegg lcl|cic:CICLE_v10022379mg 3 109 + 107 none 55.44 193 96.26 4e-69 hypothetical protein
blastp_kegg lcl|cit:102626272 3 109 + 107 none 55.44 193 96.26 4e-69 GTP-binding protein SAR1A-like
blastp_kegg lcl|csv:101221276 3 109 + 107 none 55.44 193 95.33 6e-69 GTP-binding protein SAR1A-like
blastp_pdb 2fa9_B 4 108 + 105 none 55.56 189 59.05 1e-41 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2fa9_A 4 108 + 105 none 55.56 189 59.05 1e-41 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2fmx_B 4 108 + 105 none 53.85 195 59.05 1e-41 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fmx_A 4 108 + 105 none 53.85 195 59.05 1e-41 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 1f6b_B 4 108 + 105 none 53.03 198 59.05 3e-41 mol:protein length:198 SAR1
blastp_pdb 1f6b_A 4 108 + 105 none 53.03 198 59.05 3e-41 mol:protein length:198 SAR1
blastp_pdb 2gao_B 4 108 + 105 none 50.48 208 57.14 2e-38 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2gao_A 4 108 + 105 none 50.48 208 57.14 2e-38 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 1m2o_D 3 108 + 106 Gaps:5 53.16 190 58.42 2e-31 mol:protein length:190 GTP-binding protein SAR1
blastp_pdb 1m2o_B 3 108 + 106 Gaps:5 53.16 190 58.42 2e-31 mol:protein length:190 GTP-binding protein SAR1
blastp_uniprot_sprot sp|O04834|SAR1A_ARATH 3 109 + 107 none 55.44 193 93.46 1e-68 GTP-binding protein SAR1A OS Arabidopsis thaliana GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|O04266|SAR1A_BRACM 3 109 + 107 none 55.44 193 92.52 4e-67 GTP-binding protein SAR1A OS Brassica campestris GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|Q01474|SAR1B_ARATH 3 108 + 106 none 54.92 193 93.40 4e-67 GTP-binding protein SAR1B OS Arabidopsis thaliana GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|O04267|SAR1B_BRACM 3 108 + 106 Gaps:2 55.38 195 89.81 5e-63 GTP-binding protein SAR1B OS Brassica campestris GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|P52884|SAR2_SOLLC 3 109 + 107 none 55.44 193 84.11 9e-62 GTP-binding protein SAR2 OS Solanum lycopersicum GN SAR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q4P0I7|SAR1_USTMA 3 108 + 106 Gaps:3 54.50 189 66.02 4e-41 Small COPII coat GTPase SAR1 OS Ustilago maydis (strain 521 / FGSC 9021) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CR30|SAR1_CRYNJ 3 108 + 106 Gaps:3 54.50 189 67.96 4e-41 Small COPII coat GTPase SAR1 OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CR31|SAR1_CRYNB 3 108 + 106 Gaps:3 54.50 189 67.96 4e-41 Small COPII coat GTPase SAR1 OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9QVY3|SAR1B_CRIGR 4 108 + 105 none 53.03 198 59.05 9e-41 GTP-binding protein SAR1b OS Cricetulus griseus GN SAR1B PE 1 SV 1
blastp_uniprot_sprot sp|Q5HZY2|SAR1B_RAT 4 108 + 105 none 53.03 198 59.05 1e-40 GTP-binding protein SAR1b OS Rattus norvegicus GN Sar1b PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 3 108 106 SSF52540 none none IPR027417
Gene3D 4 109 106 G3DSA:3.40.50.300 none none IPR027417
ProSiteProfiles 1 108 108 PS51422 none small GTPase SAR1 family profile. IPR006687
PRINTS 38 59 22 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 82 106 25 PR00328 none GTP-binding SAR1 protein signature IPR006689
SMART 1 108 108 SM00178 none Sar1p-like members of the Ras-family of small GTPases IPR006687
PANTHER 3 109 107 PTHR11711:SF12 none none IPR006687
Pfam 3 108 106 PF00025 none ADP-ribosylation factor family IPR006689
PANTHER 3 109 107 PTHR11711 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting