Protein : Qrob_P0041220.2 Q. robur
Protein Identifier  ? Qrob_P0041220.2 Organism . Name  Quercus robur
Score  17.0 Score Type  egn
Protein Description  (M=1) KOG0074//KOG0075//KOG0077 - GTP-binding ADP-ribosylation factor-like protein ARL3 [General function prediction only]. // GTP-binding ADP-ribosylation factor-like protein [General function prediction only]. // Vesicle coat complex COPII GTPase subunit SAR1 [Intracellular trafficking secretion and vesicular transport]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 225  
Kegg Orthology  K07953
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_004790 4 224 + 221 Gaps:48 87.92 265 40.34 5e-29 Secretion-associated RAS super family 2 isoform 1
blastp_kegg lcl|aly:ARALYDRAFT_337811 17 223 + 207 Gaps:86 75.71 210 48.43 6e-22 SAR1 secretion-associated ras
blastp_kegg lcl|mus:103972399 17 224 + 208 Gaps:65 74.09 193 49.65 2e-21 GTP-binding protein SAR1A-like
blastp_kegg lcl|tcc:TCM_021328 17 224 + 208 Gaps:65 74.09 193 49.65 2e-21 Ras-related small GTP-binding family protein
blastp_kegg lcl|mdm:103419158 9 224 + 216 Gaps:65 78.65 192 47.68 9e-21 GTP-binding protein SAR1A
blastp_kegg lcl|cic:CICLE_v10022379mg 17 224 + 208 Gaps:65 74.09 193 49.65 1e-20 hypothetical protein
blastp_kegg lcl|cit:102626272 17 224 + 208 Gaps:65 74.09 193 49.65 1e-20 GTP-binding protein SAR1A-like
blastp_kegg lcl|mus:103969819 17 224 + 208 Gaps:65 74.09 193 49.65 1e-20 GTP-binding protein SAR1A
blastp_kegg lcl|bdi:100834596 17 224 + 208 Gaps:32 74.09 193 53.85 2e-20 GTP-binding protein SAR1A-like
blastp_kegg lcl|pop:POPTR_0013s01120g 17 223 + 207 Gaps:32 73.96 192 56.34 2e-20 POPTRDRAFT_1096041 hypothetical protein
blastp_pdb 2fmx_B 11 223 + 213 Gaps:65 75.90 195 39.19 1e-16 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fmx_A 11 223 + 213 Gaps:65 75.90 195 39.19 1e-16 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 1f6b_B 11 223 + 213 Gaps:65 74.75 198 39.19 2e-16 mol:protein length:198 SAR1
blastp_pdb 1f6b_A 11 223 + 213 Gaps:65 74.75 198 39.19 2e-16 mol:protein length:198 SAR1
blastp_pdb 2fa9_B 11 223 + 213 Gaps:65 78.31 189 38.51 2e-15 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2fa9_A 11 223 + 213 Gaps:65 78.31 189 38.51 2e-15 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2gao_B 11 223 + 213 Gaps:69 71.15 208 36.49 2e-14 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2gao_A 11 223 + 213 Gaps:69 71.15 208 36.49 2e-14 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2qtv_B 19 120 + 102 Gaps:2 59.88 167 36.00 3e-09 mol:protein length:167 Small COPII coat GTPase SAR1
blastp_pdb 1m2o_D 19 120 + 102 Gaps:2 52.63 190 36.00 1e-08 mol:protein length:190 GTP-binding protein SAR1
blastp_uniprot_sprot sp|O04266|SAR1A_BRACM 17 224 + 208 Gaps:37 74.09 193 57.34 1e-20 GTP-binding protein SAR1A OS Brassica campestris GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|O04834|SAR1A_ARATH 17 224 + 208 Gaps:37 74.09 193 54.55 2e-20 GTP-binding protein SAR1A OS Arabidopsis thaliana GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|Q01474|SAR1B_ARATH 4 223 + 220 Gaps:37 82.90 193 51.88 3e-20 GTP-binding protein SAR1B OS Arabidopsis thaliana GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|O04267|SAR1B_BRACM 17 223 + 207 Gaps:34 73.85 195 54.86 4e-20 GTP-binding protein SAR1B OS Brassica campestris GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|P52884|SAR2_SOLLC 17 224 + 208 Gaps:32 74.09 193 54.55 1e-18 GTP-binding protein SAR2 OS Solanum lycopersicum GN SAR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5HZY2|SAR1B_RAT 11 223 + 213 Gaps:65 74.75 198 39.19 8e-16 GTP-binding protein SAR1b OS Rattus norvegicus GN Sar1b PE 2 SV 1
blastp_uniprot_sprot sp|Q9CQC9|SAR1B_MOUSE 11 223 + 213 Gaps:65 74.75 198 39.19 9e-16 GTP-binding protein SAR1b OS Mus musculus GN Sar1b PE 1 SV 1
blastp_uniprot_sprot sp|Q9QVY3|SAR1B_CRIGR 11 223 + 213 Gaps:65 74.75 198 39.19 9e-16 GTP-binding protein SAR1b OS Cricetulus griseus GN SAR1B PE 1 SV 1
blastp_uniprot_sprot sp|Q5PYH3|SAR1B_PIG 11 223 + 213 Gaps:65 74.75 198 39.19 1e-15 GTP-binding protein SAR1b OS Sus scrofa GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y6B6|SAR1B_HUMAN 11 223 + 213 Gaps:65 74.75 198 38.51 1e-15 GTP-binding protein SAR1b OS Homo sapiens GN SAR1B PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 1 223 223 PS51422 none small GTPase SAR1 family profile. IPR006687
SMART 1 223 223 SM00178 none Sar1p-like members of the Ras-family of small GTPases IPR006687
SUPERFAMILY 22 96 75 SSF52540 none none IPR027417
PRINTS 43 68 26 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 16 40 25 PR00328 none GTP-binding SAR1 protein signature IPR006689
PANTHER 21 102 82 PTHR11711 none none none
PANTHER 168 224 57 PTHR11711 none none none
Pfam 24 96 73 PF00025 none ADP-ribosylation factor family IPR006689
Gene3D 24 96 73 G3DSA:3.40.50.300 none none IPR027417
PANTHER 21 102 82 PTHR11711:SF12 none none IPR006687
PANTHER 168 224 57 PTHR11711:SF12 none none IPR006687

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting