Protein : Qrob_P0041160.2 Q. robur
Protein Identifier  ? Qrob_P0041160.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=10) K07953 - GTP-binding protein SAR1 [EC:3.6.5.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 240  
Kegg Orthology  K07953
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10022379mg 33 239 + 207 Gaps:54 90.67 193 48.57 7e-30 hypothetical protein
blastp_kegg lcl|cit:102626272 33 239 + 207 Gaps:54 90.67 193 48.57 7e-30 GTP-binding protein SAR1A-like
blastp_kegg lcl|cmo:103492761 33 239 + 207 Gaps:54 90.67 193 48.57 1e-29 GTP-binding protein SAR1A
blastp_kegg lcl|rcu:RCOM_1347400 33 239 + 207 Gaps:54 90.67 193 48.57 2e-29 GTP-binding protein sar1 putative
blastp_kegg lcl|vvi:100240934 33 239 + 207 Gaps:54 90.67 193 48.00 3e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|vvi:100248702 33 239 + 207 Gaps:54 90.67 193 48.00 3e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|csv:101221276 33 239 + 207 Gaps:54 90.67 193 48.00 4e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|sot:102595918 23 239 + 217 Gaps:54 95.85 193 46.49 5e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|sly:101267027 23 239 + 217 Gaps:54 95.85 193 46.49 5e-29 GTP-binding protein SAR1A-like
blastp_kegg lcl|pxb:103967165 33 239 + 207 Gaps:54 90.67 193 48.57 5e-29 GTP-binding protein SAR1A
blastp_pdb 2gao_B 22 238 + 217 Gaps:50 88.94 208 34.05 5e-15 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2gao_A 22 238 + 217 Gaps:50 88.94 208 34.05 5e-15 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 1m2o_D 32 238 + 207 Gaps:51 89.47 190 34.12 5e-14 mol:protein length:190 GTP-binding protein SAR1
blastp_pdb 1m2o_B 32 238 + 207 Gaps:51 89.47 190 34.12 5e-14 mol:protein length:190 GTP-binding protein SAR1
blastp_pdb 2fmx_B 22 238 + 217 Gaps:42 94.87 195 31.89 3e-13 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fmx_A 22 238 + 217 Gaps:42 94.87 195 31.89 3e-13 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 1f6b_B 15 238 + 224 Gaps:47 98.48 198 31.79 3e-13 mol:protein length:198 SAR1
blastp_pdb 1f6b_A 15 238 + 224 Gaps:47 98.48 198 31.79 3e-13 mol:protein length:198 SAR1
blastp_pdb 2qtv_B 35 237 + 203 Gaps:51 99.40 167 33.73 7e-13 mol:protein length:167 Small COPII coat GTPase SAR1
blastp_pdb 2fa9_B 22 238 + 217 Gaps:44 97.88 189 30.81 8e-12 mol:protein length:189 GTP-binding protein SAR1b
blastp_uniprot_sprot sp|O04834|SAR1A_ARATH 33 239 + 207 Gaps:54 90.67 193 46.29 3e-28 GTP-binding protein SAR1A OS Arabidopsis thaliana GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|O04266|SAR1A_BRACM 33 239 + 207 Gaps:54 90.67 193 45.71 8e-28 GTP-binding protein SAR1A OS Brassica campestris GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|P52884|SAR2_SOLLC 33 239 + 207 Gaps:54 90.67 193 45.14 8e-28 GTP-binding protein SAR2 OS Solanum lycopersicum GN SAR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q01474|SAR1B_ARATH 33 238 + 206 Gaps:54 90.16 193 45.40 4e-27 GTP-binding protein SAR1B OS Arabidopsis thaliana GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|O04267|SAR1B_BRACM 33 238 + 206 Gaps:42 90.26 195 44.89 4e-27 GTP-binding protein SAR1B OS Brassica campestris GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|P52885|SAR1_TOBAC 33 239 + 207 Gaps:51 90.91 198 39.44 2e-20 GTP-binding protein SAR1 OS Nicotiana tabacum GN SAR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q23445|SAR1_CAEEL 22 238 + 217 Gaps:52 95.85 193 35.14 7e-18 GTP-binding protein SAR1 OS Caenorhabditis elegans GN ZK180.4 PE 3 SV 1
blastp_uniprot_sprot sp|Q559R0|SAR1A_DICDI 32 238 + 207 Gaps:48 90.96 188 35.09 5e-17 GTP-binding protein Sar1A OS Dictyostelium discoideum GN sarA PE 1 SV 1
blastp_uniprot_sprot sp|Q4P0I7|SAR1_USTMA 33 238 + 206 Gaps:55 90.48 189 38.60 6e-17 Small COPII coat GTPase SAR1 OS Ustilago maydis (strain 521 / FGSC 9021) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9P4C8|SAR1_PICPG 32 238 + 207 Gaps:46 91.05 190 35.26 7e-17 Small COPII coat GTPase SAR1 OS Komagataella pastoris (strain GS115 / ATCC 20864) GN SAR1 PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 28 238 211 G3DSA:3.40.50.300 none none IPR027417
PANTHER 128 160 33 PTHR11711 none none none
Phobius 170 190 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 29 125 97 PF00025 none ADP-ribosylation factor family IPR006689
SMART 22 238 217 SM00178 none Sar1p-like members of the Ras-family of small GTPases IPR006687
PANTHER 189 239 51 PTHR11711:SF12 none none IPR006687
PANTHER 31 110 80 PTHR11711:SF12 none none IPR006687
PANTHER 128 160 33 PTHR11711:SF12 none none IPR006687
SUPERFAMILY 66 154 89 SSF52540 none none IPR027417
Phobius 1 169 169 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 1 238 238 PS51422 none small GTPase SAR1 family profile. IPR006687
PANTHER 189 239 51 PTHR11711 none none none
PANTHER 31 110 80 PTHR11711 none none none
Phobius 191 239 49 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting