Protein : Qrob_P0041110.2 Q. robur
Protein Identifier  ? Qrob_P0041110.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR18929:SF39 - GLUCOCEREBROSIDASE Alias (in v1)  Qrob_P0215810.1
Code Enzyme  EC:5.3.4.1 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 363  
Kegg Orthology  K09584
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0016853 isomerase activity Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.

48 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sly:101244123 8 362 + 355 Gaps:2 98.33 359 82.44 0.0 protein disulfide isomerase-like 2-1-like
blastp_kegg lcl|sot:102601464 8 362 + 355 Gaps:2 98.33 359 81.87 0.0 protein disulfide-isomerase like 2-1-like
blastp_kegg lcl|vvi:100258052 11 362 + 352 Gaps:1 98.32 357 83.19 0.0 probable protein disulfide-isomerase A6-like
blastp_kegg lcl|rcu:RCOM_1347720 9 362 + 354 none 98.61 359 81.07 0.0 protein disulfide isomerase putative (EC:5.3.4.1)
blastp_kegg lcl|pop:POPTR_0002s19940g 7 362 + 356 none 99.16 359 81.18 0.0 POPTRDRAFT_816711 thioredoxin family protein
blastp_kegg lcl|pmum:103344008 15 362 + 348 none 96.13 362 82.18 0.0 probable protein disulfide-isomerase A6
blastp_kegg lcl|pxb:103930571 10 362 + 353 Gaps:1 97.79 362 82.20 0.0 probable protein disulfide-isomerase A6
blastp_kegg lcl|mdm:103433881 10 362 + 353 none 97.78 361 81.59 0.0 probable protein disulfide-isomerase A6
blastp_kegg lcl|gmx:100037471 11 362 + 352 Gaps:1 96.43 364 81.77 0.0 protein disulfide isomerase-like protein
blastp_kegg lcl|fve:101292222 15 362 + 348 none 96.13 362 81.61 0.0 probable protein disulfide-isomerase A6-like
blastp_pdb 3idv_A 29 256 + 228 Gaps:9 92.53 241 44.84 8e-51 mol:protein length:241 Protein disulfide-isomerase A4
blastp_pdb 2alb_A 28 256 + 229 Gaps:11 98.23 113 57.66 5e-26 mol:protein length:113 Protein disulfide-isomerase A3
blastp_pdb 1mek_A 27 256 + 230 Gaps:5 94.17 120 55.75 9e-26 mol:protein length:120 PROTEIN DISULFIDE ISOMERASE
blastp_pdb 2dml_A 19 247 + 229 Gaps:10 81.54 130 59.43 1e-25 mol:protein length:130 Protein disulfide-isomerase A6
blastp_pdb 2dmm_A 29 249 + 221 Gaps:5 76.76 142 55.05 5e-25 mol:protein length:142 Protein disulfide-isomerase A3
blastp_pdb 2dj3_A 45 251 + 207 Gaps:4 81.20 133 54.63 1e-24 mol:protein length:133 Protein disulfide-isomerase A4
blastp_pdb 3f8u_C 28 256 + 229 Gaps:32 57.59 481 49.82 4e-24 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3f8u_A 28 256 + 229 Gaps:32 57.59 481 49.82 4e-24 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 2kp1_A 29 251 + 223 Gaps:15 89.26 121 56.48 6e-24 mol:protein length:121 Protein disulfide-isomerase
blastp_pdb 2djj_A 29 251 + 223 Gaps:15 89.26 121 56.48 6e-24 mol:protein length:121 Protein disulfide-isomerase
blastp_uniprot_sprot sp|P38661|PDIA6_MEDSA 32 362 + 331 none 90.93 364 81.27 0.0 Probable protein disulfide-isomerase A6 OS Medicago sativa PE 1 SV 1
blastp_uniprot_sprot sp|O22263|PDI21_ARATH 32 361 + 330 none 91.41 361 77.27 0.0 Protein disulfide-isomerase like 2-1 OS Arabidopsis thaliana GN PDIL2-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q942L2|PDI22_ORYSJ 26 362 + 337 none 90.84 371 74.48 0.0 Protein disulfide isomerase-like 2-2 OS Oryza sativa subsp. japonica GN PDIL2-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q75M08|PDI21_ORYSJ 27 362 + 336 none 91.80 366 74.40 0.0 Protein disulfide isomerase-like 2-1 OS Oryza sativa subsp. japonica GN PDIL2-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q86IA3|PDI1_DICDI 11 361 + 351 Gaps:9 96.97 363 47.16 2e-102 Protein disulfide-isomerase 1 OS Dictyostelium discoideum GN pdi1 PE 1 SV 2
blastp_uniprot_sprot sp|O13811|PDI2_SCHPO 16 361 + 346 Gaps:8 96.38 359 42.20 6e-89 Protein disulfide-isomerase C17H9.14c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC17H9.14c PE 3 SV 1
blastp_uniprot_sprot sp|Q00216|TIGA_ASPNG 19 361 + 343 Gaps:17 94.15 359 44.38 1e-79 Protein disulfide-isomerase tigA OS Aspergillus niger GN tigA PE 2 SV 1
blastp_uniprot_sprot sp|Q92249|ERP38_NEUCR 32 361 + 330 Gaps:9 90.24 369 41.14 4e-72 Protein disulfide-isomerase erp38 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN erp38 PE 2 SV 2
blastp_uniprot_sprot sp|Q29RV1|PDIA4_BOVIN 29 254 + 226 Gaps:28 58.16 643 46.52 2e-48 Protein disulfide-isomerase A4 OS Bos taurus GN PDIA4 PE 2 SV 1
blastp_uniprot_sprot sp|Q63081|PDIA6_RAT 10 247 + 238 Gaps:33 58.86 440 40.54 4e-48 Protein disulfide-isomerase A6 OS Rattus norvegicus GN Pdia6 PE 1 SV 2

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 12 361 350 PTHR18929:SF39 none none none
Coils 285 306 22 Coil none none none
Phobius 27 362 336 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 48 66 19 PS00194 none Thioredoxin family active site. IPR017937
PANTHER 12 361 350 PTHR18929 none none none
PRINTS 174 183 10 PR00421 none Thioredoxin family signature none
PRINTS 216 227 12 PR00421 none Thioredoxin family signature none
PRINTS 166 174 9 PR00421 none Thioredoxin family signature none
SUPERFAMILY 20 132 113 SSF52833 none none IPR012336
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 6 21 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 141 254 114 PS51352 none Thioredoxin domain profile. IPR012336
Gene3D 145 262 118 G3DSA:3.40.30.10 none none IPR012336
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 22 26 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 26 139 114 G3DSA:3.40.30.10 none none IPR012336
Pfam 29 132 104 PF00085 none Thioredoxin IPR013766
Pfam 147 251 105 PF00085 none Thioredoxin IPR013766
Gene3D 267 361 95 G3DSA:1.20.1150.12 none none IPR011679
SUPERFAMILY 267 361 95 SSF47933 none none IPR011679
TIGRFAM 150 252 103 TIGR01126 none pdi_dom: protein disulfide-isomerase domain IPR005788
TIGRFAM 32 133 102 TIGR01126 none pdi_dom: protein disulfide-isomerase domain IPR005788
SUPERFAMILY 144 254 111 SSF52833 none none IPR012336
Pfam 268 362 95 PF07749 none Endoplasmic reticulum protein ERp29, C-terminal domain IPR011679
ProSitePatterns 167 185 19 PS00194 none Thioredoxin family active site. IPR017937
ProSiteProfiles 15 135 121 PS51352 none Thioredoxin domain profile. IPR012336

4 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 26 25
TMHMM 7 26 19
SignalP_GRAM_NEGATIVE 1 26 25
SignalP_EUK 1 26 25

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.971 0.024 NON-PLANT 26