Protein : Qrob_P0040770.2 Q. robur
Protein Identifier  ? Qrob_P0040770.2 Organism . Name  Quercus robur
Score  1.4 Score Type  egn
Protein Description  (M=11) PTHR22595:SF37 - CHITINASE-RELATED (PTHR22595:SF37) Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 267  
Kegg Orthology  K01183
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103957731 44 266 + 223 Gaps:5 97.85 233 73.68 3e-123 endochitinase PR4-like
blastp_kegg lcl|pxb:103957707 44 266 + 223 Gaps:5 97.85 233 73.68 3e-123 endochitinase PR4-like
blastp_kegg lcl|pxb:103957750 44 266 + 223 Gaps:5 97.85 233 73.25 1e-122 endochitinase PR4-like
blastp_kegg lcl|pop:POPTR_0019s12360g 64 266 + 203 none 73.82 275 83.25 6e-122 POPTRDRAFT_574380 hypothetical protein
blastp_kegg lcl|mdm:103432770 65 266 + 202 none 74.26 272 79.70 1e-119 endochitinase PR4-like
blastp_kegg lcl|pper:PRUPE_ppa010731mg 37 266 + 230 Gaps:9 98.74 238 70.21 4e-119 hypothetical protein
blastp_kegg lcl|pmum:103322431 37 266 + 230 Gaps:9 98.74 238 70.64 2e-118 endochitinase PR4-like
blastp_kegg lcl|pmum:103322429 37 266 + 230 Gaps:9 98.74 238 69.79 7e-118 endochitinase PR4-like
blastp_kegg lcl|fve:101291199 65 266 + 202 none 71.38 283 77.72 7e-118 endochitinase PR4-like
blastp_kegg lcl|pmum:103322428 64 266 + 203 none 73.82 275 76.85 3e-116 endochitinase PR4-like
blastp_pdb 3hbh_A 64 266 + 203 Gaps:7 100.00 204 58.33 2e-76 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbe_X 64 266 + 203 Gaps:7 100.00 204 58.33 2e-76 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbd_A 64 266 + 203 Gaps:7 100.00 204 58.33 2e-76 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 1cns_B 64 266 + 203 Gaps:37 97.12 243 44.92 2e-53 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 64 266 + 203 Gaps:37 97.12 243 44.92 2e-53 mol:protein length:243 CHITINASE
blastp_pdb 2cjl_B 89 266 + 178 Gaps:12 92.16 204 49.47 1e-52 mol:protein length:204 SECRETED CHITINASE
blastp_pdb 2cjl_A 89 266 + 178 Gaps:12 92.16 204 49.47 1e-52 mol:protein length:204 SECRETED CHITINASE
blastp_pdb 2baa_A 64 266 + 203 Gaps:37 97.12 243 44.07 2e-52 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 2z37_D 65 266 + 202 Gaps:36 96.72 244 36.86 4e-51 mol:protein length:244 Chitinase
blastp_pdb 2z37_C 65 266 + 202 Gaps:36 96.72 244 36.86 4e-51 mol:protein length:244 Chitinase
blastp_uniprot_sprot sp|P27054|CHI4_PHAVU 66 266 + 201 Gaps:1 74.81 270 71.78 6e-104 Endochitinase PR4 OS Phaseolus vulgaris GN CHI4 PE 2 SV 1
blastp_uniprot_sprot sp|O04138|CHI4_ORYSJ 64 266 + 203 none 71.23 285 68.97 3e-99 Chitinase 4 OS Oryza sativa subsp. japonica GN Cht4 PE 2 SV 2
blastp_uniprot_sprot sp|Q7Y1Z0|CHI5_ORYSJ 64 266 + 203 none 70.49 288 68.97 3e-98 Chitinase 5 OS Oryza sativa subsp. japonica GN Cht5 PE 2 SV 1
blastp_uniprot_sprot sp|Q06209|CHI4_BRANA 65 266 + 202 Gaps:5 73.51 268 69.04 2e-96 Basic endochitinase CHB4 OS Brassica napus PE 1 SV 2
blastp_uniprot_sprot sp|P42820|CHIP_BETVU 64 266 + 203 Gaps:4 70.49 288 64.04 4e-88 Acidic endochitinase SP2 OS Beta vulgaris GN SP2 PE 1 SV 1
blastp_uniprot_sprot sp|P29022|CHIA_MAIZE 64 266 + 203 Gaps:1 72.14 280 63.86 8e-88 Endochitinase A OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|Q6K8R2|CHI6_ORYSJ 64 266 + 203 Gaps:2 75.65 271 60.98 2e-84 Chitinase 6 OS Oryza sativa subsp. japonica GN Cht6 PE 2 SV 1
blastp_uniprot_sprot sp|P29023|CHIB_MAIZE 64 266 + 203 Gaps:1 75.09 269 61.39 3e-84 Endochitinase B (Fragment) OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P80052|CHIT_DIOJA 64 266 + 203 Gaps:5 82.40 250 58.74 2e-81 Acidic endochitinase OS Dioscorea japonica PE 1 SV 2
blastp_uniprot_sprot sp|Q05537|CHID_SOLLC 63 266 + 204 Gaps:37 96.34 246 40.93 7e-56 Basic endochitinase (Fragment) OS Solanum lycopersicum GN CHI14 PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 195 266 72 G3DSA:1.10.530.10 none none none
Gene3D 67 132 66 G3DSA:1.10.530.10 none none none
Phobius 61 266 206 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 142 194 53 G3DSA:3.30.20.10 none none none
ProSitePatterns 200 210 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
Phobius 1 42 42 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSitePatterns 85 107 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
PANTHER 64 266 203 PTHR22595 none none none
PANTHER 64 266 203 PTHR22595:SF37 none none none
Pfam 68 266 199 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Phobius 43 60 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 64 266 203 SSF53955 none none IPR023346

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting