Protein : Qrob_P0040760.2 Q. robur
Protein Identifier  ? Qrob_P0040760.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=11) PTHR22595:SF37 - CHITINASE-RELATED (PTHR22595:SF37) Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 234  
Kegg Orthology  K01183
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103957731 11 233 + 223 Gaps:5 97.85 233 73.25 5e-124 endochitinase PR4-like
blastp_kegg lcl|pxb:103957707 11 233 + 223 Gaps:5 97.85 233 73.25 5e-124 endochitinase PR4-like
blastp_kegg lcl|pxb:103957750 11 233 + 223 Gaps:5 97.85 233 72.81 2e-123 endochitinase PR4-like
blastp_kegg lcl|pop:POPTR_0019s12360g 31 233 + 203 none 73.82 275 82.27 2e-121 POPTRDRAFT_574380 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa010731mg 1 233 + 233 Gaps:9 100.00 238 68.49 6e-120 hypothetical protein
blastp_kegg lcl|mdm:103432770 32 233 + 202 none 74.26 272 78.71 2e-119 endochitinase PR4-like
blastp_kegg lcl|pmum:103322431 1 233 + 233 Gaps:9 100.00 238 68.91 6e-119 endochitinase PR4-like
blastp_kegg lcl|pmum:103322429 1 233 + 233 Gaps:9 100.00 238 68.07 2e-118 endochitinase PR4-like
blastp_kegg lcl|fve:101291199 32 233 + 202 none 71.38 283 76.73 2e-117 endochitinase PR4-like
blastp_kegg lcl|pmum:103322428 31 233 + 203 none 73.82 275 76.35 3e-116 endochitinase PR4-like
blastp_pdb 3hbh_A 31 233 + 203 Gaps:7 100.00 204 57.84 7e-76 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbe_X 31 233 + 203 Gaps:7 100.00 204 57.84 7e-76 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 3hbd_A 31 233 + 203 Gaps:7 100.00 204 57.84 7e-76 mol:protein length:204 Class IV chitinase Chia4-Pa2
blastp_pdb 1cns_B 31 233 + 203 Gaps:37 97.12 243 44.49 3e-53 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 31 233 + 203 Gaps:37 97.12 243 44.49 3e-53 mol:protein length:243 CHITINASE
blastp_pdb 2cjl_B 56 233 + 178 Gaps:12 92.16 204 49.47 3e-53 mol:protein length:204 SECRETED CHITINASE
blastp_pdb 2cjl_A 56 233 + 178 Gaps:12 92.16 204 49.47 3e-53 mol:protein length:204 SECRETED CHITINASE
blastp_pdb 2baa_A 31 233 + 203 Gaps:37 97.12 243 43.64 2e-52 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 2z37_D 31 233 + 203 Gaps:36 97.13 244 36.71 7e-52 mol:protein length:244 Chitinase
blastp_pdb 2z37_C 31 233 + 203 Gaps:36 97.13 244 36.71 7e-52 mol:protein length:244 Chitinase
blastp_uniprot_sprot sp|P27054|CHI4_PHAVU 33 233 + 201 Gaps:1 74.81 270 70.30 1e-102 Endochitinase PR4 OS Phaseolus vulgaris GN CHI4 PE 2 SV 1
blastp_uniprot_sprot sp|O04138|CHI4_ORYSJ 31 233 + 203 none 71.23 285 68.97 3e-99 Chitinase 4 OS Oryza sativa subsp. japonica GN Cht4 PE 2 SV 2
blastp_uniprot_sprot sp|Q7Y1Z0|CHI5_ORYSJ 31 233 + 203 none 70.49 288 68.47 4e-98 Chitinase 5 OS Oryza sativa subsp. japonica GN Cht5 PE 2 SV 1
blastp_uniprot_sprot sp|Q06209|CHI4_BRANA 32 233 + 202 Gaps:5 73.51 268 68.53 1e-96 Basic endochitinase CHB4 OS Brassica napus PE 1 SV 2
blastp_uniprot_sprot sp|P42820|CHIP_BETVU 31 233 + 203 Gaps:4 70.49 288 64.04 1e-88 Acidic endochitinase SP2 OS Beta vulgaris GN SP2 PE 1 SV 1
blastp_uniprot_sprot sp|P29022|CHIA_MAIZE 31 233 + 203 Gaps:1 72.14 280 63.37 8e-88 Endochitinase A OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|Q6K8R2|CHI6_ORYSJ 31 233 + 203 Gaps:2 75.65 271 60.49 6e-85 Chitinase 6 OS Oryza sativa subsp. japonica GN Cht6 PE 2 SV 1
blastp_uniprot_sprot sp|P29023|CHIB_MAIZE 32 233 + 202 Gaps:1 74.72 269 61.19 4e-84 Endochitinase B (Fragment) OS Zea mays PE 1 SV 1
blastp_uniprot_sprot sp|P80052|CHIT_DIOJA 31 233 + 203 Gaps:5 82.40 250 59.71 3e-83 Acidic endochitinase OS Dioscorea japonica PE 1 SV 2
blastp_uniprot_sprot sp|Q05537|CHID_SOLLC 30 233 + 204 Gaps:37 96.34 246 40.51 6e-56 Basic endochitinase (Fragment) OS Solanum lycopersicum GN CHI14 PE 2 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 35 233 199 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 34 99 66 G3DSA:1.10.530.10 none none none
Gene3D 162 233 72 G3DSA:1.10.530.10 none none none
ProSitePatterns 52 74 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
PANTHER 31 233 203 PTHR22595:SF37 none none none
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 22 29 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 109 161 53 G3DSA:3.30.20.10 none none none
PIRSF 5 233 229 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
ProSitePatterns 167 177 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
Phobius 30 233 204 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 31 233 203 PTHR22595 none none none
SUPERFAMILY 31 233 203 SSF53955 none none IPR023346
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
SignalP_EUK 1 29 28
TMHMM 10 27 17

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 1 0.965 0.029 NON-PLANT 25