Protein : Qrob_P0040050.2 Q. robur
Protein Identifier  ? Qrob_P0040050.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=15) PTHR10334 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 203  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005576 extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_036825 3 202 + 200 Gaps:47 82.70 185 69.28 5e-65 STS14 protein putative
blastp_kegg lcl|pop:POPTR_0018s03600g 7 202 + 196 Gaps:47 64.50 231 71.81 2e-63 POPTRDRAFT_261668 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0107330 80 202 + 123 none 71.93 171 75.61 3e-62 STS14 protein precursor putative
blastp_kegg lcl|pmum:103325397 11 202 + 192 Gaps:47 84.30 172 69.66 3e-58 pathogenesis-related protein PRMS-like
blastp_kegg lcl|pper:PRUPE_ppa016600mg 11 202 + 192 Gaps:47 98.64 147 68.97 1e-57 hypothetical protein
blastp_kegg lcl|fve:101293281 15 202 + 188 Gaps:47 80.11 176 68.09 1e-56 pathogenesis-related protein PR-1-like
blastp_kegg lcl|atr:s00019p00199860 4 202 + 199 Gaps:47 83.52 182 61.18 6e-56 AMTR_s00019p00199860 hypothetical protein
blastp_kegg lcl|mdm:103446143 12 202 + 191 Gaps:47 61.54 234 67.36 1e-55 pathogenesis-related protein PR-1-like
blastp_kegg lcl|sly:101264239 12 202 + 191 Gaps:47 79.56 181 64.58 3e-54 pathogenesis-related protein PR-1-like
blastp_kegg lcl|sot:102594592 8 202 + 195 Gaps:47 70.81 209 63.51 4e-54 pathogenesis-related protein PR-1-like
blastp_pdb 1cfe_A 80 202 + 123 Gaps:3 88.89 135 45.00 1e-27 mol:protein length:135 PATHOGENESIS-RELATED PROTEIN P14A
blastp_pdb 2vzn_B 82 198 + 117 Gaps:14 60.09 218 25.95 8e-06 mol:protein length:218 VENOM ALLERGEN 3
blastp_pdb 2vzn_A 82 198 + 117 Gaps:14 60.09 218 25.95 8e-06 mol:protein length:218 VENOM ALLERGEN 3
blastp_uniprot_sprot sp|Q00008|PRMS_MAIZE 80 202 + 123 Gaps:2 74.85 167 49.60 1e-37 Pathogenesis-related protein PRMS OS Zea mays GN PRMS PE 2 SV 1
blastp_uniprot_sprot sp|Q40374|PR1_MEDTR 77 202 + 126 Gaps:1 73.41 173 48.82 5e-37 Pathogenesis-related protein PR-1 OS Medicago truncatula GN PR-1 PE 2 SV 1
blastp_uniprot_sprot sp|P09042|PR1C_TOBAC 80 202 + 123 none 73.21 168 46.34 4e-36 Pathogenesis-related protein 1C OS Nicotiana tabacum PE 2 SV 3
blastp_uniprot_sprot sp|P35792|PR12_HORVU 80 202 + 123 Gaps:2 76.22 164 46.40 3e-35 Pathogenesis-related protein PRB1-2 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P07053|PR1B_TOBAC 80 202 + 123 none 73.21 168 45.53 9e-35 Pathogenesis-related protein 1B OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|Q05968|PR1_HORVU 80 202 + 123 Gaps:2 76.22 164 46.40 9e-35 Pathogenesis-related protein 1 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P35793|PR13_HORVU 88 202 + 115 Gaps:2 71.34 164 47.86 4e-33 Pathogenesis-related protein PRB1-3 OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P08299|PR1A_TOBAC 80 202 + 123 none 73.21 168 43.90 8e-33 Pathogenesis-related protein 1A OS Nicotiana tabacum PE 1 SV 1
blastp_uniprot_sprot sp|Q41359|PR1_SAMNI 80 202 + 123 Gaps:1 74.25 167 44.35 3e-31 Pathogenesis-related protein PR-1 type OS Sambucus nigra PE 2 SV 1
blastp_uniprot_sprot sp|P33154|PR1_ARATH 80 202 + 123 Gaps:3 74.53 161 45.00 3e-31 Pathogenesis-related protein 1 OS Arabidopsis thaliana GN At2g14610 PE 1 SV 1
rpsblast_cdd gnl|CDD|88560 80 202 + 123 Gaps:1 91.18 136 51.61 8e-45 cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain PR-1 like subfamily. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1) which accumulates after infections with pathogens and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs mammalian cysteine-rich secretory proteins and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases..
rpsblast_cdd gnl|CDD|88563 83 198 + 116 Gaps:6 86.82 129 36.61 2e-18 cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain PRY1-like sub-family restricted to fungi. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1) CRISPs mammalian cysteine-rich secretory proteins and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune..
rpsblast_cdd gnl|CDD|197569 85 192 + 108 Gaps:14 79.17 144 35.09 7e-18 smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.
rpsblast_cdd gnl|CDD|88561 21 196 + 176 Gaps:48 98.48 132 32.31 3e-16 cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain golgi-associated plant pathogenesis related protein (GAPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1) CRISPs mammalian cysteine-rich secretory proteins which combine SCP with a C-terminal cysteine rich domain and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms..
rpsblast_cdd gnl|CDD|88557 83 191 + 109 Gaps:11 86.89 122 32.08 1e-14 cd00168 SCP SCP: SCP-like extracellular protein domain found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1) which accumulates after infections with pathogens and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs mammalian cysteine-rich secretory proteins which combine SCP with a C-terminal cysteine rich domain and allergen 5 from vespid venom. Roles for CRISP in response to pathogens fertilization and sperm maturation have been proposed. One member Tex31 from the venom duct of Conus textile has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family such as the CRISPs are involved in and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine a toxic peptide secreted by the beaded lizard blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains..
rpsblast_cdd gnl|CDD|88559 84 191 + 108 Gaps:8 80.56 144 27.59 1e-13 cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain as found mainly in eukaryotes. This family includes plant pathogenesis-related protein 1 (PR-1) CRISPs mammalian cysteine-rich secretory proteins and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases..
rpsblast_cdd gnl|CDD|88565 87 190 + 104 Gaps:7 81.62 136 34.23 7e-13 cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1 a tail-tip epidermis marker in ascidians. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1) CRISPs mammalian cysteine-rich secretory proteins and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases..

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 19 57 39 PTHR10334:SF170 none none none
PANTHER 19 57 39 PTHR10334 none none IPR001283
PANTHER 105 202 98 PTHR10334 none none IPR001283
ProSitePatterns 185 196 12 PS01010 none CRISP family signature 2. IPR018244
SMART 19 198 180 SM00198 none SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. IPR014044
Pfam 28 79 52 PF00188 none Cysteine-rich secretory protein family IPR014044
Pfam 80 190 111 PF00188 none Cysteine-rich secretory protein family IPR014044
SUPERFAMILY 83 201 119 SSF55797 none none IPR014044
PANTHER 105 202 98 PTHR10334:SF170 none none none
Gene3D 81 201 121 G3DSA:3.40.33.10 none none IPR014044
Gene3D 20 79 60 G3DSA:3.40.33.10 none none IPR014044
PRINTS 40 58 19 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 158 174 17 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 185 198 14 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
SUPERFAMILY 13 79 67 SSF55797 none none IPR014044

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

0 Targeting