Protein : Qrob_P0039970.2 Q. robur
Protein Identifier  ? Qrob_P0039970.2 Organism . Name  Quercus robur
Score  27.1 Score Type  egn
Protein Description  (M=2) 1.7.1.2 - Nitrate reductase (NAD(P)H). Code Enzyme  EC:1.7.1.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 268  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0042128 nitrate assimilation The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102610866 48 225 + 178 Gaps:57 25.61 902 57.14 7e-72 nitrate reductase [NAD(P)H]-like
blastp_kegg lcl|cic:CICLE_v10000220mg 48 225 + 178 Gaps:57 25.61 902 57.14 9e-72 hypothetical protein
blastp_kegg lcl|vvi:100264320 48 225 + 178 Gaps:64 26.40 909 55.00 3e-70 nitrate reductase [NADH]-like
blastp_kegg lcl|rcu:RCOM_1032820 48 225 + 178 Gaps:65 26.15 914 53.97 8e-68 nitrate reductase putative (EC:1.7.1.1)
blastp_kegg lcl|pop:POPTR_0005s16180g 48 225 + 178 Gaps:60 26.25 899 53.39 4e-67 POPTRDRAFT_818506 nitrate reductase family protein
blastp_kegg lcl|fve:101295234 49 225 + 177 Gaps:52 25.42 901 54.15 9e-66 nitrate reductase [NADH]-like
blastp_kegg lcl|cmo:103499266 48 225 + 178 Gaps:68 26.67 915 52.46 8e-65 nitrate reductase [NADH]
blastp_kegg lcl|csv:101219000 48 225 + 178 Gaps:68 26.67 915 52.05 9e-65 NR2 nitrate reductase [NADH]-like
blastp_kegg lcl|csv:101228157 48 225 + 178 Gaps:68 26.67 915 51.64 5e-64 nitrate reductase [NADH]-like
blastp_kegg lcl|pop:POPTR_0002s08930g 48 225 + 178 Gaps:62 25.96 909 52.54 3e-63 POPTRDRAFT_551506 ORF family protein
blastp_pdb 2bih_A 113 226 + 114 Gaps:55 35.65 474 40.83 9e-25 mol:protein length:474 NITRATE REDUCTASE [NADPH]
blastp_pdb 2bii_B 130 226 + 97 Gaps:49 34.43 424 41.10 6e-21 mol:protein length:424 NITRATE REDUCTASE [NADPH]
blastp_pdb 2bii_A 130 226 + 97 Gaps:49 34.43 424 41.10 6e-21 mol:protein length:424 NITRATE REDUCTASE [NADPH]
blastp_pdb 3hc2_A 106 225 + 120 Gaps:40 33.48 466 30.13 5e-11 mol:protein length:466 sulfite oxidase
blastp_pdb 3r19_A 106 225 + 120 Gaps:40 33.48 466 30.13 5e-11 mol:protein length:466 Sulfite oxidase
blastp_pdb 3r18_A 106 225 + 120 Gaps:40 33.48 466 30.13 5e-11 mol:protein length:466 Sulfite oxidase
blastp_pdb 1sox_B 106 225 + 120 Gaps:40 33.48 466 30.13 5e-11 mol:protein length:466 SULFITE OXIDASE
blastp_pdb 1sox_A 106 225 + 120 Gaps:40 33.48 466 30.13 5e-11 mol:protein length:466 SULFITE OXIDASE
blastp_pdb 2a9d_B 130 225 + 96 Gaps:33 34.68 372 31.78 8e-11 mol:protein length:372 Sulfite Oxidase
blastp_pdb 2a9d_A 130 225 + 96 Gaps:33 34.68 372 31.78 8e-11 mol:protein length:372 Sulfite Oxidase
blastp_uniprot_sprot sp|P27783|NIA_BETPN 48 225 + 178 Gaps:55 25.95 898 60.94 3e-81 Nitrate reductase [NAD(P)H] OS Betula pendula GN NIA1 PE 2 SV 1
blastp_uniprot_sprot sp|P36859|NIA_PETHY 48 225 + 178 Gaps:72 26.40 909 51.25 4e-65 Nitrate reductase [NADH] OS Petunia hybrida GN NIA PE 2 SV 1
blastp_uniprot_sprot sp|P17569|NIA_CUCMA 48 225 + 178 Gaps:72 27.02 918 49.60 2e-63 Nitrate reductase [NADH] OS Cucurbita maxima PE 2 SV 1
blastp_uniprot_sprot sp|P43101|NIA_CICIN 48 225 + 178 Gaps:66 25.87 920 49.58 5e-63 Nitrate reductase [NADH] OS Cichorium intybus GN NIA PE 2 SV 1
blastp_uniprot_sprot sp|P08509|NIA2_TOBAC 48 224 + 177 Gaps:74 26.00 904 48.51 2e-62 Nitrate reductase [NADH] 2 OS Nicotiana tabacum GN NIA2 PE 2 SV 2
blastp_uniprot_sprot sp|P17570|NIA_SOLLC 48 224 + 177 Gaps:73 26.34 911 48.33 1e-61 Nitrate reductase [NADH] OS Solanum lycopersicum GN NIA PE 3 SV 1
blastp_uniprot_sprot sp|P11605|NIA1_TOBAC 48 225 + 178 Gaps:74 26.11 904 47.46 3e-57 Nitrate reductase [NADH] 1 OS Nicotiana tabacum GN NIA1 PE 3 SV 1
blastp_uniprot_sprot sp|P39868|NIA2_BRANA 48 225 + 178 Gaps:78 26.78 911 46.72 1e-56 Nitrate reductase [NADH] clone PBNBR1412 OS Brassica napus GN NIA2 PE 2 SV 1
blastp_uniprot_sprot sp|P23312|NIA_SPIOL 89 225 + 137 Gaps:41 19.22 926 56.74 4e-56 Nitrate reductase [NADH] OS Spinacia oleracea GN NIA PE 2 SV 1
blastp_uniprot_sprot sp|P39865|NIA1_PHAVU 48 225 + 178 Gaps:48 24.97 881 49.09 2e-55 Nitrate reductase [NADH] 1 OS Phaseolus vulgaris GN NIA1 PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 26 46 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 2 12 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 17 25 9 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 111 226 116 SSF56524 none none IPR000572
Pfam 156 225 70 PF00174 none Oxidoreductase molybdopterin binding domain IPR000572
Phobius 13 16 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 23 223 201 PTHR19370 none none none
Gene3D 156 226 71 G3DSA:3.90.420.10 none none IPR000572
PANTHER 23 223 201 PTHR19370:SF86 none none none
Phobius 1 16 16 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 47 267 221 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 21 43 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 42   Secretory pathway 3 0.940 0.350 NON-PLANT 42