Protein : Qrob_P0039840.2 Q. robur
Protein Identifier  ? Qrob_P0039840.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) PF00560//PF13504//PF13855 - Leucine Rich Repeat // Leucine rich repeat // Leucine rich repeat Gene Prediction Quality  validated
Protein length 

Sequence

Length: 478  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_011886 1 477 + 477 Gaps:2 100.00 477 70.65 0.0 Leucine-rich repeat family protein
blastp_kegg lcl|pmum:103341417 1 463 + 463 Gaps:3 96.87 479 70.04 0.0 piriformospora indica-insensitive protein 2-like
blastp_kegg lcl|pvu:PHAVU_007G101600g 1 473 + 473 Gaps:2 99.37 476 68.29 0.0 hypothetical protein
blastp_kegg lcl|gmx:100800942 1 474 + 474 Gaps:5 99.58 479 68.34 0.0 piriformospora indica-insensitive protein 2-like
blastp_kegg lcl|rcu:RCOM_0704490 34 477 + 444 Gaps:1 100.00 443 70.65 0.0 serine-threonine protein kinase plant-type putative (EC:1.3.1.74)
blastp_kegg lcl|vvi:100247391 34 473 + 440 Gaps:3 98.88 446 72.34 0.0 piriformospora indica-insensitive protein 2-like
blastp_kegg lcl|gmx:100784756 1 474 + 474 Gaps:3 99.58 477 68.63 0.0 piriformospora indica-insensitive protein 2-like
blastp_kegg lcl|pop:POPTR_0008s11370g 22 426 + 405 Gaps:1 94.64 429 75.86 0.0 POPTRDRAFT_421512 hypothetical protein
blastp_kegg lcl|fve:101291237 1 462 + 462 Gaps:3 96.66 479 66.95 0.0 piriformospora indica-insensitive protein 2-like
blastp_kegg lcl|pper:PRUPE_ppa018259mg 34 464 + 431 Gaps:3 95.15 454 72.22 0.0 hypothetical protein
blastp_pdb 3rj0_A 116 377 + 262 Gaps:102 84.33 772 38.71 2e-15 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 116 377 + 262 Gaps:102 84.33 772 38.71 2e-15 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgz_A 116 377 + 262 Gaps:102 84.77 768 38.71 2e-15 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 116 377 + 262 Gaps:102 84.77 768 38.71 2e-15 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 158 353 + 196 Gaps:26 54.31 313 34.71 4e-14 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_pdb 1ozn_A 157 347 + 191 Gaps:3 67.37 285 31.25 5e-10 mol:protein length:285 Reticulon 4 receptor
blastp_pdb 1p8t_A 157 347 + 191 Gaps:3 67.37 285 31.25 5e-10 mol:protein length:285 Reticulon 4 receptor
blastp_pdb 3kj4_D 157 347 + 191 Gaps:3 67.13 286 30.73 1e-08 mol:protein length:286 Reticulon-4 receptor
blastp_pdb 3kj4_A 157 347 + 191 Gaps:3 67.13 286 30.73 1e-08 mol:protein length:286 Reticulon-4 receptor
blastp_pdb 2omx_A 139 373 + 235 Gaps:40 53.46 462 32.79 1e-08 mol:protein length:462 Internalin-A
blastp_uniprot_sprot sp|Q5PP26|PII2_ARATH 23 418 + 396 Gaps:15 95.52 424 61.23 2e-161 Piriformospora indica-insensitive protein 2 OS Arabidopsis thaliana GN PII-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSD1|TMM_ARATH 30 400 + 371 Gaps:20 73.59 496 37.81 2e-52 Protein TOO MANY MOUTHS OS Arabidopsis thaliana GN TMM PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVP0|Y5639_ARATH 63 402 + 340 Gaps:93 59.26 1102 51.45 2e-33 Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS Arabidopsis thaliana GN At5g63930 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FIZ3|GSO2_ARATH 144 396 + 253 Gaps:41 52.64 1252 46.59 2e-31 LRR receptor-like serine/threonine-protein kinase GSO2 OS Arabidopsis thaliana GN GSO2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LHP4|RCH2_ARATH 106 380 + 275 Gaps:70 54.25 1141 47.50 3e-31 Receptor-like protein kinase 2 OS Arabidopsis thaliana GN RCH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9H7|RLP12_ARATH 54 406 + 353 Gaps:163 81.11 847 46.58 6e-31 Receptor-like protein 12 OS Arabidopsis thaliana GN RLP12 PE 2 SV 2
blastp_uniprot_sprot sp|C0LGQ5|GSO1_ARATH 103 384 + 282 Gaps:111 62.21 1249 52.90 3e-30 LRR receptor-like serine/threonine-protein kinase GSO1 OS Arabidopsis thaliana GN GSO1 PE 2 SV 1
blastp_uniprot_sprot sp|C0LGV1|RCH1_ARATH 139 383 + 245 Gaps:42 51.10 1135 51.55 4e-30 LRR receptor-like serine/threonine-protein kinase RCH1 OS Arabidopsis thaliana GN RCH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZG8|Y4885_ARATH 132 385 + 254 Gaps:31 51.10 1045 44.38 1e-29 Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS Arabidopsis thaliana GN At4g08850 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LP24|Y1571_ARATH 106 438 + 333 Gaps:146 63.30 1120 52.47 2e-29 Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS Arabidopsis thaliana GN At1g35710 PE 2 SV 1

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 133 377 245 G3DSA:3.80.10.10 none none none
Gene3D 44 100 57 G3DSA:3.80.10.10 none none none
SMART 191 214 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 239 262 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 336 360 25 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 263 286 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
Pfam 338 351 14 PF13504 none Leucine rich repeat IPR001611
PANTHER 138 377 240 PTHR24420 none none none
PANTHER 5 89 85 PTHR24420 none none none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 314 336 23 PF00560 none Leucine Rich Repeat IPR001611
Pfam 193 215 23 PF00560 none Leucine Rich Repeat IPR001611
Phobius 26 477 452 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 21 25 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 10 20 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 143 400 258 SSF52058 none none none
PRINTS 263 276 14 PR00019 none Leucine-rich repeat signature none
PRINTS 242 255 14 PR00019 none Leucine-rich repeat signature none
Pfam 244 300 57 PF13855 none Leucine rich repeat IPR001611

2 Localization

Analysis Start End Length
SignalP_EUK 1 25 24
SignalP_GRAM_NEGATIVE 1 23 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 1 0.970 0.019 NON-PLANT 25