Protein : Qrob_P0039730.2 Q. robur
Protein Identifier  ? Qrob_P0039730.2 Organism . Name  Quercus robur
Score  89.8 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 183  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103341637 1 182 + 182 Gaps:46 100.00 156 56.41 8e-40 uncharacterized LOC103341637
blastp_kegg lcl|pper:PRUPE_ppa022665mg 1 168 + 168 Gaps:43 89.10 156 60.43 5e-37 hypothetical protein
blastp_kegg lcl|vvi:100852498 11 182 + 172 Gaps:38 94.81 154 51.37 2e-34 uncharacterized LOC100852498
blastp_kegg lcl|rcu:RCOM_0704790 1 182 + 182 Gaps:43 98.79 165 51.53 6e-32 hypothetical protein
blastp_kegg lcl|pop:POPTR_0010s14060g 1 170 + 170 Gaps:37 88.20 178 50.96 5e-29 POPTRDRAFT_566681 hypothetical protein
blastp_kegg lcl|vvi:100261105 1 170 + 170 Gaps:37 95.45 154 48.98 1e-25 uncharacterized LOC100261105
blastp_kegg lcl|cic:CICLE_v10022495mg 18 170 + 153 Gaps:19 87.78 180 41.14 3e-24 hypothetical protein
blastp_kegg lcl|pop:POPTR_0012s05610g 18 175 + 158 Gaps:28 86.75 166 43.06 8e-24 POPTRDRAFT_823303 hypothetical protein
blastp_kegg lcl|cit:102618409 18 170 + 153 Gaps:22 87.98 183 41.61 3e-23 uncharacterized LOC102618409
blastp_kegg lcl|rcu:RCOM_1618130 18 170 + 153 Gaps:15 83.04 171 44.37 7e-22 hypothetical protein

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 35 182 148 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 34 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
TMHMM 15 34 19

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 33   Secretory pathway 4 0.541 0.171 NON-PLANT 33