Protein : Qrob_P0039710.2 Q. robur
Protein Identifier  ? Qrob_P0039710.2 Organism . Name  Quercus robur
Score  92.1 Score Type  egn
Protein Description  (M=1) K13115 - coiled-coil domain-containing protein 130 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 321  
Kegg Orthology  K13115
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0 Synonyms

0 GO Terms

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0008s11460g 24 320 + 297 Gaps:8 97.44 313 82.95 0.0 POPTRDRAFT_564483 hypothetical protein
blastp_kegg lcl|tcc:TCM_011876 24 312 + 289 Gaps:9 96.13 310 83.89 0.0 Family of Uncharacterized protein function (DUF572)
blastp_kegg lcl|pop:POPTR_0010s14040g 24 320 + 297 Gaps:8 97.44 313 83.61 0.0 POPTRDRAFT_658951 hypothetical protein
blastp_kegg lcl|pmum:103341426 24 320 + 297 Gaps:8 97.44 313 80.66 2e-180 coiled-coil domain-containing protein 130-like
blastp_kegg lcl|mtr:MTR_1g093770 24 318 + 295 Gaps:8 97.12 312 81.52 1e-178 Coiled-coil domain-containing protein
blastp_kegg lcl|cmo:103489246 24 316 + 293 Gaps:8 96.17 313 80.73 1e-178 coiled-coil domain-containing protein 130-like
blastp_kegg lcl|rcu:RCOM_0704810 24 320 + 297 Gaps:8 98.39 310 78.69 3e-178 Coiled-coil domain-containing protein putative
blastp_kegg lcl|pvu:PHAVU_001G005600g 24 318 + 295 Gaps:11 97.09 309 81.00 6e-178 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_003G026300g 24 314 + 291 Gaps:8 95.83 312 81.27 8e-178 hypothetical protein
blastp_kegg lcl|csv:101224464 24 320 + 297 Gaps:8 97.44 313 79.02 1e-176 coiled-coil domain-containing protein 130-like
blastp_uniprot_sprot sp|Q5EA37|CC130_BOVIN 33 271 + 239 Gaps:17 63.50 400 47.24 4e-64 Coiled-coil domain-containing protein 130 OS Bos taurus GN CCDC130 PE 2 SV 1
blastp_uniprot_sprot sp|Q32PZ9|CC130_RAT 26 278 + 253 Gaps:17 69.61 385 44.03 5e-63 Coiled-coil domain-containing protein 130 OS Rattus norvegicus GN Ccdc130 PE 2 SV 1
blastp_uniprot_sprot sp|P13994|CC130_HUMAN 33 266 + 234 Gaps:17 62.88 396 47.39 2e-62 Coiled-coil domain-containing protein 130 OS Homo sapiens GN CCDC130 PE 1 SV 2
blastp_uniprot_sprot sp|Q9D516|CC130_MOUSE 26 271 + 246 Gaps:17 67.79 385 44.06 1e-61 Coiled-coil domain-containing protein 130 OS Mus musculus GN Ccdc130 PE 2 SV 1
blastp_uniprot_sprot sp|Q54TR4|CC130_DICDI 26 269 + 244 Gaps:24 82.46 325 39.93 5e-58 Coiled-coil domain-containing protein 130 homolog OS Dictyostelium discoideum GN DDB_G0281599 PE 3 SV 1
blastp_uniprot_sprot sp|Q6DJK9|CC130_XENLA 26 267 + 242 Gaps:17 66.93 384 44.36 5e-57 Coiled-coil domain-containing protein 130 OS Xenopus laevis GN ccdc130 PE 2 SV 1
blastp_uniprot_sprot sp|Q66I85|CC130_DANRE 33 267 + 235 Gaps:17 64.10 390 44.80 5e-57 Coiled-coil domain-containing protein 130 homolog OS Danio rerio GN ccdc130 PE 2 SV 1
blastp_uniprot_sprot sp|Q7K0F0|CC130_DROME 26 248 + 223 Gaps:13 74.68 316 42.37 4e-54 Coiled-coil domain-containing protein 130 homolog OS Drosophila melanogaster GN CG15084 PE 2 SV 1
blastp_uniprot_sprot sp|Q09651|CC130_CAEEL 26 266 + 241 Gaps:19 69.92 369 39.53 1e-47 Coiled-coil domain-containing protein 130 homolog OS Caenorhabditis elegans GN ZK1307.9 PE 1 SV 1
blastp_uniprot_sprot sp|O60141|CWC16_SCHPO 61 267 + 207 Gaps:27 73.58 299 33.64 6e-27 Protein saf4 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN saf4 PE 3 SV 2
rpsblast_cdd gnl|CDD|191009 33 314 + 282 Gaps:40 83.49 321 32.09 6e-37 pfam04502 DUF572 Family of unknown function (DUF572). Family of eukaryotic proteins with undetermined function.
rpsblast_cdd gnl|CDD|34735 33 288 + 256 Gaps:30 98.53 272 27.24 6e-16 COG5134 COG5134 Uncharacterized conserved protein [Function unknown].
rpsblast_kog gnl|CDD|38201 26 314 + 289 Gaps:20 93.69 317 52.19 4e-89 KOG2990 KOG2990 KOG2990 C2C2-type Zn-finger protein [Function unknown].
rpsblast_kog gnl|CDD|38200 33 262 + 230 Gaps:28 90.12 253 28.07 8e-13 KOG2989 KOG2989 KOG2989 Uncharacterized conserved protein [Function unknown].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 30 296 267 PTHR12111:SF2 none none none
PANTHER 30 296 267 PTHR12111 none none IPR007590
Pfam 33 286 254 PF04502 none Family of unknown function (DUF572) IPR007590
Coils 199 224 26 Coil none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

0 Targeting