Protein : Qrob_P0038770.2 Q. robur
Protein Identifier  ? Qrob_P0038770.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 290  
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0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005902 4 289 + 286 Gaps:21 100.00 283 59.36 1e-95 hypothetical protein
blastp_kegg lcl|pmum:103330501 1 289 + 289 Gaps:40 100.00 301 56.15 4e-93 uncharacterized LOC103330501
blastp_kegg lcl|cic:CICLE_v10032288mg 1 289 + 289 Gaps:60 100.00 291 57.73 4e-88 hypothetical protein
blastp_kegg lcl|cit:102623852 1 289 + 289 Gaps:60 100.00 291 57.39 1e-87 uncharacterized LOC102623852
blastp_kegg lcl|pper:PRUPE_ppa011500mg 111 289 + 179 Gaps:1 86.54 208 74.44 2e-87 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s06820g 38 289 + 252 Gaps:40 70.59 374 58.71 5e-87 POPTRDRAFT_557756 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s27580g 39 289 + 251 Gaps:27 80.61 330 59.02 3e-86 POPTRDRAFT_173265 hypothetical protein
blastp_kegg lcl|pxb:103945857 1 289 + 289 Gaps:22 100.00 307 56.35 3e-85 uncharacterized LOC103945857
blastp_kegg lcl|rcu:RCOM_1524270 53 279 + 227 Gaps:20 77.47 293 61.67 1e-84 hypothetical protein
blastp_kegg lcl|mdm:103438388 1 289 + 289 Gaps:18 100.00 307 56.35 7e-83 uncharacterized LOC103438388

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 233 243 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 182 182 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 244 264 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 201 211 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 265 269 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 183 200 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 288 289 2 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 212 232 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 270 287 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

4 Localization

Analysis Start End Length
TMHMM 264 286 22
TMHMM 183 200 17
SignalP_GRAM_POSITIVE 1 30 29
TMHMM 210 232 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 120   Mitochondrion 1 0.054 0.900 NON-PLANT 120