Protein : Qrob_P0038510.2 Q. robur
Protein Identifier  ? Qrob_P0038510.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) PF00931//PF13504 - NB-ARC domain // Leucine rich repeat Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1368  
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Protein Sequence Displayer

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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102629952 1 1348 + 1348 Gaps:109 98.76 1447 47.45 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|tcc:TCM_045050 1 1366 + 1366 Gaps:94 97.08 1440 50.43 0.0 LRR and NB-ARC domains-containing disease resistance protein putative
blastp_kegg lcl|pop:POPTR_0004s20690g 16 1353 + 1338 Gaps:174 97.68 1464 49.58 0.0 hypothetical protein
blastp_kegg lcl|vvi:100265152 1 1339 + 1339 Gaps:168 100.00 1390 49.06 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|vvi:100248993 1 1348 + 1348 Gaps:124 99.01 1418 46.44 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|cit:102628988 1 1344 + 1344 Gaps:164 98.16 1471 44.94 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|vvi:100854556 1 1347 + 1347 Gaps:463 97.14 2204 51.14 0.0 uncharacterized LOC100854556
blastp_kegg lcl|cit:102630618 1 1348 + 1348 Gaps:163 99.04 1455 44.69 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|cit:102630833 4 1348 + 1345 Gaps:83 98.11 1427 44.86 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|cit:102628440 1 1348 + 1348 Gaps:157 98.14 1507 43.41 0.0 putative disease resistance RPP13-like protein 1-like
blastp_uniprot_sprot sp|Q9LRR4|R13L1_ARATH 1 878 + 878 Gaps:61 86.24 1054 41.69 0.0 Putative disease resistance RPP13-like protein 1 OS Arabidopsis thaliana GN RPPL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LRR5|DRL21_ARATH 21 1340 + 1320 Gaps:151 85.67 1424 41.31 9e-176 Putative disease resistance protein At3g14460 OS Arabidopsis thaliana GN At3g14460 PE 3 SV 1
blastp_uniprot_sprot sp|Q7XA42|RGA1_SOLBU 11 1018 + 1008 Gaps:161 95.30 979 37.94 2e-154 Putative disease resistance protein RGA1 OS Solanum bulbocastanum GN RGA1 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XA40|RGA3_SOLBU 11 1035 + 1025 Gaps:147 97.18 992 37.45 8e-154 Putative disease resistance protein RGA3 OS Solanum bulbocastanum GN RGA3 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XBQ9|RGA2_SOLBU 11 970 + 960 Gaps:113 97.22 970 37.22 3e-153 Disease resistance protein RGA2 OS Solanum bulbocastanum GN RGA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XA39|RGA4_SOLBU 11 1255 + 1245 Gaps:235 97.98 988 41.74 1e-146 Putative disease resistance protein RGA4 OS Solanum bulbocastanum GN RGA4 PE 2 SV 1
blastp_uniprot_sprot sp|Q39214|RPM1_ARATH 25 681 + 657 Gaps:96 73.11 926 31.02 4e-61 Disease resistance protein RPM1 OS Arabidopsis thaliana GN RPM1 PE 1 SV 1
blastp_uniprot_sprot sp|Q38834|R13L4_ARATH 6 860 + 855 Gaps:109 97.18 852 28.38 5e-58 Disease resistance RPP13-like protein 4 OS Arabidopsis thaliana GN RPP13L4 PE 2 SV 2
blastp_uniprot_sprot sp|Q8W3K3|DRL8_ARATH 6 870 + 865 Gaps:128 95.49 910 27.73 1e-57 Putative disease resistance protein At1g58400 OS Arabidopsis thaliana GN At1g58400 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FJB5|RP8L3_ARATH 42 864 + 823 Gaps:124 90.68 901 29.25 6e-56 Disease resistance RPP8-like protein 3 OS Arabidopsis thaliana GN RPP8L3 PE 2 SV 1
rpsblast_cdd gnl|CDD|201512 178 461 + 284 Gaps:10 98.95 285 43.26 7e-71 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|178749 180 1339 + 1160 Gaps:318 62.19 1153 36.54 1e-11 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_kog gnl|CDD|39857 32 892 + 861 Gaps:70 95.28 889 29.28 1e-112 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 1179 1201 23 PS51450 none Leucine-rich repeat profile. IPR001611
Gene3D 742 1033 292 G3DSA:3.80.10.10 none none none
ProSiteProfiles 631 654 24 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 608 629 22 PS51450 none Leucine-rich repeat profile. IPR001611
Gene3D 576 660 85 G3DSA:3.80.10.10 none none none
Coils 38 59 22 Coil none none none
SUPERFAMILY 844 1035 192 SSF52047 none none none
PANTHER 1078 1311 234 PTHR23155 none none none
PANTHER 1017 1041 25 PTHR23155 none none none
PANTHER 586 865 280 PTHR23155 none none none
PANTHER 1017 1041 25 PTHR23155:SF419 none none none
PRINTS 275 289 15 PR00364 none Disease resistance protein signature none
PRINTS 201 216 16 PR00364 none Disease resistance protein signature none
PRINTS 372 386 15 PR00364 none Disease resistance protein signature none
PRINTS 604 620 17 PR00364 none Disease resistance protein signature none
PANTHER 1078 1311 234 PTHR23155:SF419 none none none
PANTHER 1 483 483 PTHR23155:SF419 none none none
PANTHER 543 557 15 PTHR23155:SF419 none none none
PANTHER 586 865 280 PTHR23155:SF419 none none none
Pfam 1085 1101 17 PF13504 none Leucine rich repeat IPR001611
Pfam 608 623 16 PF13504 none Leucine rich repeat IPR001611
Pfam 179 462 284 PF00931 none NB-ARC domain IPR002182
SUPERFAMILY 497 895 399 SSF52058 none none none
PANTHER 543 557 15 PTHR23155 none none none
PANTHER 1 483 483 PTHR23155 none none none
SUPERFAMILY 159 435 277 SSF52540 none none IPR027417
SUPERFAMILY 1059 1342 284 SSF52058 none none none
Gene3D 177 325 149 G3DSA:3.40.50.300 none none IPR027417
Gene3D 1060 1339 280 G3DSA:3.80.10.10 none none none
ProSiteProfiles 1086 1108 23 PS51450 none Leucine-rich repeat profile. IPR001611

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting