Protein : Qrob_P0038360.2 Q. robur
Protein Identifier  ? Qrob_P0038360.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=7) K17964 - leucine-rich PPR motif-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 223  
Kegg Orthology  K17964
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Protein Sequence Displayer

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0 Synonyms

0 GO Terms

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102623075 1 222 + 222 Gaps:50 33.02 1181 45.90 6e-69 pentatricopeptide repeat-containing protein At5g61990 mitochondrial-like
blastp_kegg lcl|cic:CICLE_v10010938mg 1 222 + 222 Gaps:50 33.02 1181 45.90 6e-69 hypothetical protein
blastp_kegg lcl|vvi:100251738 1 193 + 193 Gaps:8 21.07 935 60.91 5e-63 pentatricopeptide repeat-containing protein At5g61990 mitochondrial-like
blastp_kegg lcl|fve:101311960 5 221 + 217 Gaps:9 27.13 811 51.82 4e-58 pentatricopeptide repeat-containing protein At5g61990 mitochondrial-like
blastp_kegg lcl|pda:103707812 36 222 + 187 Gaps:3 20.11 935 54.79 1e-55 pentatricopeptide repeat-containing protein At5g61990 mitochondrial-like
blastp_kegg lcl|pmum:103338146 22 221 + 200 Gaps:5 19.92 1019 51.23 4e-55 pentatricopeptide repeat-containing protein At5g61990 mitochondrial
blastp_kegg lcl|vvi:100245882 18 222 + 205 Gaps:8 20.87 1011 51.18 5e-55 pentatricopeptide repeat-containing protein At5g61990 mitochondrial-like
blastp_kegg lcl|mdm:103437481 23 221 + 199 Gaps:12 20.37 1026 50.24 7e-55 pentatricopeptide repeat-containing protein At5g61990 mitochondrial
blastp_kegg lcl|pxb:103958353 23 221 + 199 Gaps:12 20.39 1025 50.24 1e-54 pentatricopeptide repeat-containing protein At5g61990 mitochondrial-like
blastp_kegg lcl|pxb:103931323 23 221 + 199 Gaps:12 20.37 1026 50.24 1e-54 pentatricopeptide repeat-containing protein At5g61990 mitochondrial-like
blastp_uniprot_sprot sp|Q9FIT7|PP442_ARATH 30 222 + 193 Gaps:4 20.02 974 38.46 2e-34 Pentatricopeptide repeat-containing protein At5g61990 mitochondrial OS Arabidopsis thaliana GN At5g61990 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZ10|PP338_ARATH 84 218 + 135 Gaps:3 26.10 521 26.47 1e-09 Pentatricopeptide repeat-containing protein At4g26680 mitochondrial OS Arabidopsis thaliana GN At4g26680 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFC5|PP360_ARATH 46 222 + 177 Gaps:20 23.46 729 30.41 6e-09 Pentatricopeptide repeat-containing protein At5g01110 OS Arabidopsis thaliana GN At5g01110 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVQ5|PP432_ARATH 81 222 + 142 Gaps:3 13.05 1096 28.67 9e-09 Pentatricopeptide repeat-containing protein At5g55840 OS Arabidopsis thaliana GN At5g55840 PE 3 SV 2
blastp_uniprot_sprot sp|Q9FND8|PP409_ARATH 30 213 + 184 Gaps:12 30.49 610 29.03 4e-08 Pentatricopeptide repeat-containing protein At5g40400 OS Arabidopsis thaliana GN At5g40400 PE 2 SV 1
blastp_uniprot_sprot sp|P0C894|PP143_ARATH 6 199 + 194 Gaps:24 23.39 761 30.90 8e-08 Putative pentatricopeptide repeat-containing protein At2g02150 OS Arabidopsis thaliana GN At2g02150 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FJE6|PP437_ARATH 26 222 + 197 Gaps:6 21.50 907 29.23 1e-06 Putative pentatricopeptide repeat-containing protein At5g59900 OS Arabidopsis thaliana GN At5g59900 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FKR3|PP404_ARATH 78 213 + 136 Gaps:1 22.99 596 27.74 5e-06 Pentatricopeptide repeat-containing protein At5g38730 OS Arabidopsis thaliana GN At5g38730 PE 2 SV 1
blastp_uniprot_sprot sp|Q3ECH5|PP107_ARATH 80 218 + 139 Gaps:1 25.37 544 25.36 9e-06 Pentatricopeptide repeat-containing protein At1g66345 mitochondrial OS Arabidopsis thaliana GN At1g66345 PE 1 SV 1

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 11 222 212 PTHR24015:SF416 none none none
PANTHER 11 222 212 PTHR24015 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 60   Mitochondrion 3 0.053 0.785 NON-PLANT 60