10 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|cic:CICLE_v10033564mg | 2 | 65 | + | 64 | none | 94.12 | 68 | 75.00 | 2e-28 | hypothetical protein |
| blastp_kegg | lcl|tcc:TCM_005887 | 2 | 68 | + | 67 | Gaps:1 | 86.84 | 76 | 72.73 | 6e-28 | F-box/WD repeat-containing protein 4 |
| blastp_kegg | lcl|mtr:MTR_8g036790 | 2 | 66 | + | 65 | none | 83.33 | 78 | 63.08 | 2e-25 | hypothetical protein |
| blastp_kegg | lcl|pop:POPTR_0009s06660g | 1 | 65 | + | 65 | none | 94.20 | 69 | 69.23 | 2e-25 | POPTRDRAFT_557769 hypothetical protein |
| blastp_kegg | lcl|cam:101490122 | 2 | 68 | + | 67 | none | 100.00 | 67 | 62.69 | 3e-25 | uncharacterized LOC101490122 |
| blastp_kegg | lcl|pmum:103330469 | 1 | 66 | + | 66 | none | 97.06 | 68 | 69.70 | 4e-25 | uncharacterized LOC103330469 |
| blastp_kegg | lcl|pper:PRUPE_ppa014472mg | 1 | 66 | + | 66 | none | 97.06 | 68 | 69.70 | 4e-25 | hypothetical protein |
| blastp_kegg | lcl|pxb:103954866 | 1 | 65 | + | 65 | none | 92.86 | 70 | 70.77 | 1e-24 | uncharacterized LOC103954866 |
| blastp_kegg | lcl|gmx:102665896 | 2 | 68 | + | 67 | none | 100.00 | 67 | 62.69 | 2e-24 | uncharacterized LOC102665896 |
| blastp_kegg | lcl|pop:POPTR_0001s27450g | 2 | 65 | + | 64 | none | 86.49 | 74 | 67.19 | 2e-24 | POPTRDRAFT_840309 hypothetical protein |
5 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| Phobius | 14 | 25 | 12 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
| Phobius | 1 | 1 | 1 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
| Phobius | 2 | 13 | 12 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
| Phobius | 1 | 25 | 25 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
| Phobius | 26 | 68 | 43 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
4 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran2_2014_vSeqBC_3P | Qrob_Chr10 | 10 | s_1A6CK6_610 | v_7092_29 | 4,28 | 0 | 23,27 | lod | 2,8619 | 7 |
| Bourran2_2015_nEpis_3P | Qrob_Chr12 | 12 | s_1AOES6_1466 | s_1B0DDG_1094 | 28,97 | 28,55 | 30,1 | lod | 3.6 | 8.4 |
| Bourran2_2014_nFork*_3P | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,28 | 7,43 | 41,48 | lod | 2,4044 | 5,5 |
| Bourran2_2015_nP_3P | Qrob_Chr12 | 12 | v_10140_295 | v_838_303 | 16 | 14,69 | 18,01 | lod | 5.1 | 13.7 |
