Protein : Qrob_P0038150.2 Q. robur
Protein Identifier  ? Qrob_P0038150.2 Organism . Name  Quercus robur
Score  8.1 Score Type  egn
Protein Description  (M=4) PTHR13301//PTHR13301:SF28 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED (PTHR13301:SF28) Code Enzyme  EC:2.4.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 615  
Kegg Orthology  K10999
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103330444 1 614 + 614 Gaps:33 53.70 1082 96.39 0.0 cellulose synthase A catalytic subunit 3 [UDP-forming]
blastp_kegg lcl|pper:PRUPE_ppa000593mg 1 614 + 614 Gaps:33 53.70 1082 96.21 0.0 hypothetical protein
blastp_kegg lcl|fve:101296424 1 614 + 614 Gaps:33 53.65 1083 96.39 0.0 cellulose synthase A catalytic subunit 3 [UDP-forming]-like
blastp_kegg lcl|sly:101246863 1 614 + 614 Gaps:33 53.65 1083 95.52 0.0 cellulose synthase A catalytic subunit 3 [UDP-forming]-like
blastp_kegg lcl|sot:102577596 1 614 + 614 Gaps:33 53.65 1083 95.35 0.0 STCESA3 cellulose synthase
blastp_kegg lcl|cam:101499537 1 614 + 614 Gaps:33 53.95 1077 95.35 0.0 cellulose synthase A catalytic subunit 3 [UDP-forming]-like
blastp_kegg lcl|mdm:103438406 1 614 + 614 Gaps:33 53.70 1082 95.18 0.0 cellulose synthase A catalytic subunit 3 [UDP-forming]
blastp_kegg lcl|rcu:RCOM_0493240 1 614 + 614 Gaps:33 53.55 1085 94.32 0.0 Cellulose synthase A catalytic subunit 6 [UDP-forming] putative (EC:2.4.1.12)
blastp_kegg lcl|gmx:100814262 1 614 + 614 Gaps:33 54.10 1074 96.04 0.0 cellulose synthase A catalytic subunit 3 [UDP-forming]-like
blastp_kegg lcl|gmx:100793104 1 614 + 614 Gaps:33 54.15 1073 95.87 0.0 cellulose synthase A catalytic subunit 3 [UDP-forming]-like
blastp_uniprot_sprot sp|Q941L0|CESA3_ARATH 1 614 + 614 Gaps:34 54.46 1065 91.55 0.0 Cellulose synthase A catalytic subunit 3 [UDP-forming] OS Arabidopsis thaliana GN CESA3 PE 1 SV 2
blastp_uniprot_sprot sp|Q84ZN6|CESA8_ORYSJ 1 614 + 614 Gaps:35 53.56 1081 92.23 0.0 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA8 PE 2 SV 1
blastp_uniprot_sprot sp|Q84M43|CESA2_ORYSJ 1 614 + 614 Gaps:36 53.87 1073 90.48 0.0 Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA2 PE 2 SV 1
blastp_uniprot_sprot sp|A2XN66|CESA2_ORYSI 1 614 + 614 Gaps:36 53.87 1073 90.48 0.0 Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS Oryza sativa subsp. indica GN CESA2 PE 3 SV 1
blastp_uniprot_sprot sp|Q6AT26|CESA1_ORYSJ 1 614 + 614 Gaps:38 53.72 1076 78.55 0.0 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA1 PE 2 SV 1
blastp_uniprot_sprot sp|A2Y0X2|CESA1_ORYSI 1 614 + 614 Gaps:38 53.72 1076 78.55 0.0 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS Oryza sativa subsp. indica GN CESA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SKJ5|CESAA_ARATH 1 600 + 600 Gaps:35 53.05 1065 76.46 0.0 Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS Arabidopsis thaliana GN CESA10 PE 2 SV 1
blastp_uniprot_sprot sp|Q69P51|CESA9_ORYSJ 1 614 + 614 Gaps:56 53.27 1055 79.54 0.0 Cellulose synthase A catalytic subunit 9 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA9 PE 2 SV 1
blastp_uniprot_sprot sp|A2Z1C8|CESA9_ORYSI 1 614 + 614 Gaps:56 53.27 1055 79.54 0.0 Cellulose synthase A catalytic subunit 9 [UDP-forming] OS Oryza sativa subsp. indica GN CESA9 PE 2 SV 1
blastp_uniprot_sprot sp|O48946|CESA1_ARATH 1 598 + 598 Gaps:35 52.08 1081 77.44 0.0 Cellulose synthase A catalytic subunit 1 [UDP-forming] OS Arabidopsis thaliana GN CESA1 PE 1 SV 1
rpsblast_cdd gnl|CDD|178244 2 614 + 613 Gaps:33 53.75 1079 95.34 0.0 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|146277 2 607 + 606 Gaps:44 78.77 716 81.21 0.0 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.
rpsblast_cdd gnl|CDD|178022 2 614 + 613 Gaps:36 53.36 1085 80.66 0.0 PLN02400 PLN02400 cellulose synthase.
rpsblast_cdd gnl|CDD|178503 2 614 + 613 Gaps:64 58.14 1044 73.31 0.0 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|178055 2 614 + 613 Gaps:45 52.83 1094 74.39 0.0 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|177841 2 614 + 613 Gaps:58 53.75 1040 80.14 0.0 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|177846 2 614 + 613 Gaps:47 58.34 977 74.39 0.0 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|177890 17 597 + 581 Gaps:95 47.40 1135 56.69 0.0 PLN02248 PLN02248 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177842 8 593 + 586 Gaps:138 67.99 756 35.60 6e-69 PLN02190 PLN02190 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|178481 1 585 + 585 Gaps:46 62.40 734 40.61 1e-55 PLN02893 PLN02893 Cellulose synthase-like protein.

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 534 544 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 2 114 113 PTHR13301:SF28 none none none
Phobius 462 484 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 424 442 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 413 423 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 148 608 461 PTHR13301:SF28 none none none
Phobius 564 574 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 596 614 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 391 391 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 575 595 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 2 114 113 PTHR13301 none none none
Phobius 485 504 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 392 412 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 505 533 29 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 545 563 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 148 608 461 PTHR13301 none none none
Phobius 443 461 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 145 607 463 PF03552 none Cellulose synthase IPR005150
Pfam 2 120 119 PF03552 none Cellulose synthase IPR005150

6 Localization

Analysis Start End Length
TMHMM 541 563 22
TMHMM 576 595 19
TMHMM 461 483 22
TMHMM 509 531 22
TMHMM 390 412 22
TMHMM 424 446 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting