Protein : Qrob_P0037520.2 Q. robur
Protein Identifier  ? Qrob_P0037520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K15711 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 2.3.2.27] Code Enzyme  EC:2.7.11.17
Gene Prediction Quality  validated Protein length 

Sequence

Length: 648  
Kegg Orthology  K15711
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides Catalysis of the hydrolysis of any acid anhydride which contains phosphorus.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103326849 1 616 + 616 Gaps:19 69.92 891 73.35 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
blastp_kegg lcl|pxb:103954104 1 616 + 616 Gaps:25 69.80 884 73.10 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
blastp_kegg lcl|pxb:103938428 1 616 + 616 Gaps:25 69.80 884 72.93 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
blastp_kegg lcl|mdm:103415525 1 616 + 616 Gaps:25 65.50 942 72.29 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
blastp_kegg lcl|pxb:103967927 1 616 + 616 Gaps:21 65.57 941 71.47 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
blastp_kegg lcl|mdm:103427241 1 616 + 616 Gaps:28 69.76 883 71.75 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
blastp_kegg lcl|vvi:100263696 3 616 + 614 Gaps:29 69.22 874 70.58 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1-like
blastp_kegg lcl|fve:101311093 1 616 + 616 Gaps:29 69.31 870 73.47 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1-like
blastp_kegg lcl|cit:102608925 15 616 + 602 Gaps:6 68.58 869 68.79 0.0 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1-like
blastp_kegg lcl|cic:CICLE_v10011059mg 40 616 + 577 Gaps:2 68.29 842 70.09 0.0 hypothetical protein
blastp_pdb 1z6a_A 366 602 + 237 Gaps:15 45.20 500 33.63 7e-26 mol:protein length:500 Helicase of the snf2/rad54 family
blastp_pdb 1z63_B 366 602 + 237 Gaps:15 45.20 500 33.63 7e-26 mol:protein length:500 Helicase of the snf2/rad54 hamily
blastp_pdb 1z63_A 366 602 + 237 Gaps:15 45.20 500 33.63 7e-26 mol:protein length:500 Helicase of the snf2/rad54 hamily
blastp_pdb 2l1i_A 37 154 + 118 Gaps:2 95.08 122 34.48 3e-17 mol:protein length:122 HLTF protein
blastp_pdb 3mwy_W 367 594 + 228 Gaps:33 28.62 800 27.95 4e-12 mol:protein length:800 Chromo domain-containing protein 1
blastp_pdb 1z3i_X 412 568 + 157 Gaps:20 25.62 644 29.70 2e-08 mol:protein length:644 similar to RAD54-like
blastp_uniprot_sprot sp|Q9FF61|SM3L1_ARATH 37 616 + 580 Gaps:25 63.22 881 67.32 0.0 Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 OS Arabidopsis thaliana GN At5g05130 PE 2 SV 1
blastp_uniprot_sprot sp|Q95216|HLTF_RABIT 6 614 + 609 Gaps:62 62.99 1005 37.91 3e-62 Helicase-like transcription factor OS Oryctolagus cuniculus GN HLTF PE 1 SV 1
blastp_uniprot_sprot sp|Q14527|HLTF_HUMAN 28 614 + 587 Gaps:35 52.23 1009 40.80 1e-60 Helicase-like transcription factor OS Homo sapiens GN HLTF PE 1 SV 2
blastp_uniprot_sprot sp|Q6PCN7|HLTF_MOUSE 9 611 + 603 Gaps:45 53.74 1003 41.37 4e-60 Helicase-like transcription factor OS Mus musculus GN Hltf PE 1 SV 1
blastp_uniprot_sprot sp|Q9FNI6|SM3L2_ARATH 200 596 + 397 Gaps:54 38.78 1029 34.84 6e-60 Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS Arabidopsis thaliana GN At5g22750 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIY7|SM3L3_ARATH 194 596 + 403 Gaps:69 30.23 1277 34.20 5e-53 Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS Arabidopsis thaliana GN At5g43530 PE 3 SV 1
blastp_uniprot_sprot sp|P0CQ66|RAD5_CRYNJ 178 601 + 424 Gaps:86 37.56 1198 33.56 9e-51 DNA repair protein RAD5 OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN RAD5 PE 3 SV 1
blastp_uniprot_sprot sp|Q5NC05|TTF2_MOUSE 210 606 + 397 Gaps:139 32.69 1138 39.25 1e-50 Transcription termination factor 2 OS Mus musculus GN Ttf2 PE 1 SV 2
blastp_uniprot_sprot sp|P0CQ67|RAD5_CRYNB 178 601 + 424 Gaps:84 37.56 1198 33.78 2e-50 DNA repair protein RAD5 OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN RAD5 PE 3 SV 1
blastp_uniprot_sprot sp|Q6CJM4|RAD5_KLULA 187 612 + 426 Gaps:93 38.69 1114 31.79 1e-49 DNA repair protein RAD5 OS Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN RAD5 PE 3 SV 1
rpsblast_cdd gnl|CDD|201060 366 596 + 231 Gaps:20 81.40 301 32.24 7e-50 pfam00176 SNF2_N SNF2 family N-terminal domain. This domain is found in proteins involved in a variety of processes including transcription regulation (e.g. SNF2 STH1 brahma MOT1) DNA repair (e.g. ERCC6 RAD16 RAD5) DNA recombination (e.g. RAD54) and chromatin unwinding (e.g. ISWI) as well as a variety of other proteins with little functional information (e.g. lodestar ETL1).
rpsblast_cdd gnl|CDD|30899 363 601 + 239 Gaps:35 30.95 866 30.22 7e-21 COG0553 HepA Superfamily II DNA/RNA helicases SNF2 family [Transcription / DNA replication recombination and repair].
rpsblast_cdd gnl|CDD|204068 41 133 + 93 Gaps:6 100.00 95 36.84 4e-16 pfam08797 HIRAN HIRAN domain. The HIRAN domain (HIP116 Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. The HIRAN domain is found as a standalone protein in several bacteria and prophages or fused to other catalytic domains such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases in the eukaryotes. It has been predicted that this domain functions as a DNA-binding domain that probably recognises features associated with damaged DNA or stalled replication forks.
rpsblast_cdd gnl|CDD|178687 367 596 + 230 Gaps:19 21.59 1033 29.15 8e-16 PLN03142 PLN03142 Probable chromatin-remodeling complex ATPase chain Provisional.

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 217 596 380 PF00176 none SNF2 family N-terminal domain IPR000330
PANTHER 178 231 54 PTHR10799:SF576 none none none
PANTHER 357 608 252 PTHR10799:SF576 none none none
SUPERFAMILY 201 295 95 SSF52540 none none IPR027417
SUPERFAMILY 363 529 167 SSF52540 none none IPR027417
PANTHER 260 284 25 PTHR10799 none none none
PANTHER 260 284 25 PTHR10799:SF576 none none none
ProSiteProfiles 255 491 237 PS51192 none Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. IPR014001
SUPERFAMILY 530 602 73 SSF52540 none none IPR027417
SMART 41 135 95 SM00910 none none IPR014905
PANTHER 178 231 54 PTHR10799 none none none
PANTHER 357 608 252 PTHR10799 none none none
Gene3D 358 491 134 G3DSA:3.40.50.300 none none IPR027417
Gene3D 208 286 79 G3DSA:3.40.50.300 none none IPR027417
SMART 210 498 289 SM00487 none DEAD-like helicases superfamily IPR014001
Pfam 42 136 95 PF08797 none HIRAN domain IPR014905

0 Localization

0 Qtllist

0 Targeting