Protein : Qrob_P0036690.2 Q. robur
Protein Identifier  ? Qrob_P0036690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) 3.4.22.41 - Cathepsin F. Code Enzyme  EC:3.4.22.41
Gene Prediction Quality  validated Protein length 

Sequence

Length: 365  
Kegg Orthology  K01373
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0008234 cysteine-type peptidase activity Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0002s03020g 14 363 + 350 Gaps:4 95.37 367 82.00 0.0 POPTRDRAFT_816035 hypothetical protein
blastp_kegg lcl|tcc:TCM_034140 24 363 + 340 Gaps:3 85.54 401 82.51 0.0 Papain family cysteine protease
blastp_kegg lcl|fve:101294426 15 361 + 347 Gaps:4 95.62 365 83.09 0.0 cysteine proteinase 15A-like
blastp_kegg lcl|gmx:100778716 14 364 + 351 Gaps:1 95.63 366 80.57 0.0 cysteine proteinase 15A-like
blastp_kegg lcl|gmx:100779565 2 363 + 362 Gaps:3 99.18 366 79.06 0.0 cysteine proteinase 15A-like
blastp_kegg lcl|cit:102608509 23 363 + 341 Gaps:3 93.22 369 81.98 0.0 cysteine proteinase 15A-like
blastp_kegg lcl|cic:CICLE_v10001559mg 25 363 + 339 Gaps:3 92.68 369 82.16 0.0 hypothetical protein
blastp_kegg lcl|pmum:103321308 17 363 + 347 Gaps:2 94.26 366 80.29 0.0 cysteine proteinase 15A-like
blastp_kegg lcl|pper:PRUPE_ppa007441mg 17 363 + 347 Gaps:2 94.01 367 80.00 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1596200 1 363 + 363 Gaps:6 99.73 366 76.16 0.0 cysteine protease putative (EC:3.4.22.16)
blastp_pdb 1cs8_A 46 354 + 309 Gaps:25 96.20 316 39.80 9e-60 mol:protein length:316 HUMAN PROCATHEPSIN L
blastp_pdb 1cjl_A 46 354 + 309 Gaps:25 97.44 312 40.13 3e-59 mol:protein length:312 PROCATHEPSIN L
blastp_pdb 2c0y_A 46 354 + 309 Gaps:28 96.19 315 36.96 2e-56 mol:protein length:315 PROCATHEPSIN S
blastp_pdb 3hwn_D 94 354 + 261 Gaps:20 98.06 258 42.69 2e-54 mol:protein length:258 Cathepsin L1
blastp_pdb 3hwn_C 94 354 + 261 Gaps:20 98.06 258 42.69 2e-54 mol:protein length:258 Cathepsin L1
blastp_pdb 3hwn_B 94 354 + 261 Gaps:20 98.06 258 42.69 2e-54 mol:protein length:258 Cathepsin L1
blastp_pdb 3hwn_A 94 354 + 261 Gaps:20 98.06 258 42.69 2e-54 mol:protein length:258 Cathepsin L1
blastp_pdb 1m6d_B 133 356 + 224 Gaps:20 98.13 214 50.00 7e-52 mol:protein length:214 Cathepsin F
blastp_pdb 1m6d_A 133 356 + 224 Gaps:20 98.13 214 50.00 7e-52 mol:protein length:214 Cathepsin F
blastp_pdb 3kfq_B 132 354 + 223 Gaps:16 98.19 221 46.54 8e-52 mol:protein length:221 Cathepsin L2
blastp_uniprot_sprot sp|P25804|CYSP_PEA 16 362 + 347 Gaps:5 95.32 363 73.99 0.0 Cysteine proteinase 15A OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|P43296|RD19A_ARATH 1 363 + 363 Gaps:7 99.46 368 72.13 0.0 Cysteine proteinase RD19a OS Arabidopsis thaliana GN RD19A PE 2 SV 1
blastp_uniprot_sprot sp|P43295|A494_ARATH 6 363 + 358 Gaps:6 98.06 361 73.16 0.0 Probable cysteine proteinase A494 OS Arabidopsis thaliana GN At2g21430 PE 2 SV 2
blastp_uniprot_sprot sp|Q10716|CYSP1_MAIZE 23 364 + 342 Gaps:10 94.34 371 71.43 0.0 Cysteine proteinase 1 OS Zea mays GN CCP1 PE 2 SV 1
blastp_uniprot_sprot sp|P04988|CYSP1_DICDI 33 355 + 323 Gaps:18 94.75 343 46.77 5e-88 Cysteine proteinase 1 OS Dictyostelium discoideum GN cprA PE 1 SV 2
blastp_uniprot_sprot sp|Q26534|CATL_SCHMA 44 360 + 317 Gaps:26 95.61 319 43.93 1e-76 Cathepsin L OS Schistosoma mansoni GN CL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9VN93|CPR1_DROME 46 355 + 310 Gaps:18 49.84 614 44.12 1e-75 Putative cysteine proteinase CG12163 OS Drosophila melanogaster GN CG12163 PE 2 SV 2
blastp_uniprot_sprot sp|Q80LP4|CATV_NPVAH 7 360 + 354 Gaps:43 100.00 337 39.17 2e-71 Viral cathepsin OS Adoxophyes honmai nucleopolyhedrovirus GN VCATH PE 3 SV 1
blastp_uniprot_sprot sp|P14658|CYSP_TRYBB 46 355 + 310 Gaps:39 66.44 450 45.15 3e-68 Cysteine proteinase OS Trypanosoma brucei brucei PE 1 SV 1
blastp_uniprot_sprot sp|Q9UBX1|CATF_HUMAN 8 356 + 349 Gaps:28 70.87 484 42.57 3e-67 Cathepsin F OS Homo sapiens GN CTSF PE 1 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 49 105 57 PF08246 none Cathepsin propeptide inhibitor domain (I29) IPR013201
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
SMART 49 105 57 SM00848 none Cathepsin propeptide inhibitor domain (I29) IPR013201
PANTHER 27 361 335 PTHR12411:SF316 none none none
PANTHER 27 361 335 PTHR12411 none none IPR013128
Phobius 23 364 342 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 299 309 11 PR00705 none Papain cysteine protease (C1) family signature IPR000668
PRINTS 321 327 7 PR00705 none Papain cysteine protease (C1) family signature IPR000668
PRINTS 150 165 16 PR00705 none Papain cysteine protease (C1) family signature IPR000668
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 17 356 340 G3DSA:3.90.70.10 none none none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSitePatterns 321 340 20 PS00640 none Eukaryotic thiol (cysteine) proteases asparagine active site. IPR025661
ProSitePatterns 297 307 11 PS00639 none Eukaryotic thiol (cysteine) proteases histidine active site. IPR025660
ProSitePatterns 150 161 12 PS00139 none Eukaryotic thiol (cysteine) proteases cysteine active site. IPR000169
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 132 355 224 PF00112 none Papain family cysteine protease IPR000668
SUPERFAMILY 46 356 311 SSF54001 none none none
SMART 132 357 226 SM00645 none Papain family cysteine protease IPR000668

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 22 21
SignalP_EUK 1 21 20
SignalP_GRAM_NEGATIVE 1 22 21

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.954 0.042 NON-PLANT 21