Protein : Qrob_P0036680.2 Q. robur
Protein Identifier  ? Qrob_P0036680.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K02154 - V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 798  
Kegg Orthology  K02154
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015991 ATP hydrolysis coupled proton transport The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
GO:0015078 hydrogen ion transmembrane transporter activity Enables the transfer of hydrogen ions from one side of a membrane to the other.
GO:0033179 proton-transporting V-type ATPase, V0 domain A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100255659 18 795 + 778 Gaps:28 92.43 872 82.75 0.0 vacuolar proton translocating ATPase 100 kDa subunit-like
blastp_kegg lcl|rcu:RCOM_1596210 18 797 + 780 Gaps:28 99.75 810 81.93 0.0 vacuolar proton atpase putative (EC:3.6.3.14)
blastp_kegg lcl|tcc:TCM_034141 10 795 + 786 Gaps:29 99.63 818 80.74 0.0 Vacuolar proton ATPase A2 isoform 2
blastp_kegg lcl|mus:103985815 4 795 + 792 Gaps:32 98.67 827 77.57 0.0 vacuolar proton ATPase a3-like
blastp_kegg lcl|pop:POPTR_0005s25550g 10 797 + 788 Gaps:28 99.88 817 78.06 0.0 POPTRDRAFT_801528 hypothetical protein
blastp_kegg lcl|fve:101304739 18 795 + 778 Gaps:31 99.63 812 81.33 0.0 vacuolar proton ATPase a3-like
blastp_kegg lcl|vvi:100258865 18 795 + 778 Gaps:28 98.05 822 80.15 0.0 vacuolar proton translocating ATPase 100 kDa subunit-like
blastp_kegg lcl|pda:103702805 18 795 + 778 Gaps:28 97.58 826 78.54 0.0 vacuolar proton ATPase a3-like
blastp_kegg lcl|sot:102606458 11 795 + 785 Gaps:28 99.39 818 78.35 0.0 vacuolar proton ATPase a2-like
blastp_kegg lcl|pop:POPTR_0002s03010g 18 797 + 780 Gaps:29 100.00 807 78.44 0.0 POPTRDRAFT_754083 hypothetical protein
blastp_uniprot_sprot sp|Q8W4S4|VHAA3_ARATH 18 797 + 780 Gaps:30 98.42 821 74.75 0.0 Vacuolar proton ATPase a3 OS Arabidopsis thaliana GN VHA-a3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SJT7|VHAA2_ARATH 18 797 + 780 Gaps:29 98.29 821 73.73 0.0 Vacuolar proton ATPase a2 OS Arabidopsis thaliana GN VHA-a2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8RWZ7|VHAA1_ARATH 18 792 + 775 Gaps:32 98.78 817 62.83 0.0 Vacuolar proton ATPase a1 OS Arabidopsis thaliana GN VHA-a1 PE 1 SV 1
blastp_uniprot_sprot sp|Q54E04|VATM_DICDI 20 788 + 769 Gaps:71 97.91 815 46.37 0.0 Vacuolar proton translocating ATPase 100 kDa subunit OS Dictyostelium discoideum GN vatM PE 1 SV 2
blastp_uniprot_sprot sp|Q8AVM5|VPP1_XENLA 19 794 + 776 Gaps:102 99.16 831 42.48 0.0 V-type proton ATPase 116 kDa subunit a isoform 1 OS Xenopus laevis GN atp6v0a1 PE 2 SV 1
blastp_uniprot_sprot sp|A1A5G6|VPP1_XENTR 19 794 + 776 Gaps:102 99.16 837 41.81 0.0 V-type proton ATPase 116 kDa subunit a isoform 1 OS Xenopus tropicalis GN atp6v0a1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Z1G4|VPP1_MOUSE 19 794 + 776 Gaps:100 99.17 839 42.43 0.0 V-type proton ATPase 116 kDa subunit a isoform 1 OS Mus musculus GN Atp6v0a1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9HBG4|VPP4_HUMAN 18 789 + 772 Gaps:105 98.69 840 42.46 0.0 V-type proton ATPase 116 kDa subunit a isoform 4 OS Homo sapiens GN ATP6V0A4 PE 1 SV 2
blastp_uniprot_sprot sp|Q920R6|VPP4_MOUSE 19 789 + 771 Gaps:94 98.56 833 43.36 0.0 V-type proton ATPase 116 kDa subunit a isoform 4 OS Mus musculus GN Atp6v0a4 PE 2 SV 1
blastp_uniprot_sprot sp|P25286|VPP1_RAT 19 794 + 776 Gaps:113 99.16 838 41.88 0.0 V-type proton ATPase 116 kDa subunit a isoform 1 OS Rattus norvegicus GN Atp6v0a1 PE 2 SV 1
rpsblast_cdd gnl|CDD|144913 42 789 + 748 Gaps:78 99.86 707 41.78 1e-177 pfam01496 V_ATPase_I V-type ATPase 116kDa subunit family. This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1.
rpsblast_cdd gnl|CDD|31460 21 789 + 769 Gaps:118 98.64 660 27.34 8e-79 COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion].
rpsblast_cdd gnl|CDD|180249 21 787 + 767 Gaps:159 98.76 646 24.92 2e-48 PRK05771 PRK05771 V-type ATP synthase subunit I Validated.
rpsblast_kog gnl|CDD|37400 18 796 + 779 Gaps:69 99.64 829 48.43 0.0 KOG2189 KOG2189 KOG2189 Vacuolar H+-ATPase V0 sector subunit a [Energy production and conversion].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 554 572 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 610 733 124 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 428 428 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 17 797 781 PTHR11629:SF62 none none none
Phobius 573 591 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 734 755 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 43 789 747 PF01496 none V-type ATPase 116kDa subunit family IPR002490
Coils 107 135 29 Coil none none none
Phobius 592 609 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 756 797 42 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 429 453 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 454 473 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 474 491 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 492 553 62 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 17 797 781 PTHR11629 none none IPR002490

5 Localization

Analysis Start End Length
TMHMM 593 615 22
TMHMM 473 495 22
TMHMM 554 573 19
TMHMM 431 453 22
TMHMM 733 755 22

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting