Protein : Qrob_P0032390.2 Q. robur
Protein Identifier  ? Qrob_P0032390.2 Organism . Name  Quercus robur
Score  76.2 Score Type  egn
Protein Description  (M=3) K17255 - Rab GDP dissociation inhibitor Gene Prediction Quality  validated
Protein length 

Sequence

Length: 334  
Kegg Orthology  K17255
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005093 Rab GDP-dissociation inhibitor activity Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103456321 1 333 + 333 none 75.00 444 92.49 0.0 guanosine nucleotide diphosphate dissociation inhibitor 2
blastp_kegg lcl|tcc:TCM_021525 1 333 + 333 none 75.00 444 92.79 0.0 Guanosine nucleotide diphosphate dissociation inhibitor 1 isoform 1
blastp_kegg lcl|cit:102625537 1 333 + 333 none 75.00 444 92.19 0.0 rab GDP dissociation inhibitor alpha-like
blastp_kegg lcl|pmum:103341356 1 333 + 333 none 75.00 444 92.19 0.0 guanosine nucleotide diphosphate dissociation inhibitor 1
blastp_kegg lcl|pper:PRUPE_ppa005772mg 1 333 + 333 none 75.00 444 92.19 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10020158mg 1 333 + 333 none 75.00 444 91.89 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1750690 1 333 + 333 none 75.00 444 92.19 0.0 protein with unknown function
blastp_kegg lcl|mdm:103417935 1 333 + 333 none 75.00 444 91.59 0.0 guanosine nucleotide diphosphate dissociation inhibitor 2
blastp_kegg lcl|pda:103715484 1 333 + 333 none 75.00 444 91.59 0.0 guanosine nucleotide diphosphate dissociation inhibitor 2
blastp_kegg lcl|sly:101259410 1 333 + 333 none 75.00 444 91.89 0.0 rab GDP dissociation inhibitor alpha-like
blastp_pdb 1gnd_A 1 333 + 333 Gaps:3 74.27 447 61.45 2e-150 mol:protein length:447 GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR
blastp_pdb 1d5t_A 1 333 + 333 Gaps:3 76.67 433 61.45 6e-150 mol:protein length:433 GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR
blastp_pdb 1lv0_A 1 333 + 333 Gaps:3 73.94 449 61.45 6e-150 mol:protein length:449 RAB GDP disossociation inhibitor alpha
blastp_pdb 3cpj_G 1 333 + 333 Gaps:7 74.94 451 53.25 7e-128 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cpi_H 1 333 + 333 Gaps:7 74.94 451 53.25 7e-128 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cpi_G 1 333 + 333 Gaps:7 74.94 451 53.25 7e-128 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cph_H 1 333 + 333 Gaps:7 74.94 451 53.25 7e-128 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cph_G 1 333 + 333 Gaps:7 74.94 451 53.25 7e-128 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 2bcg_G 1 333 + 333 Gaps:7 74.61 453 53.25 1e-127 mol:protein length:453 Secretory pathway GDP dissociation inhibitor
blastp_pdb 1ukv_G 1 333 + 333 Gaps:7 74.61 453 53.25 1e-127 mol:protein length:453 Secretory pathway GDP dissociation inhibitor
blastp_uniprot_sprot sp|P50398|GDIA_RAT 1 333 + 333 Gaps:3 74.27 447 61.45 5e-150 Rab GDP dissociation inhibitor alpha OS Rattus norvegicus GN Gdi1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7YQM0|GDIA_PONPY 1 333 + 333 Gaps:3 74.27 447 61.45 6e-150 Rab GDP dissociation inhibitor alpha OS Pongo pygmaeus GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8HXX7|GDIA_MACFA 1 333 + 333 Gaps:3 74.27 447 61.45 7e-150 Rab GDP dissociation inhibitor alpha OS Macaca fascicularis GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|P21856|GDIA_BOVIN 1 333 + 333 Gaps:3 74.27 447 61.45 8e-150 Rab GDP dissociation inhibitor alpha OS Bos taurus GN GDI1 PE 1 SV 1
blastp_uniprot_sprot sp|O97555|GDIA_CANFA 1 333 + 333 Gaps:3 74.27 447 61.14 8e-150 Rab GDP dissociation inhibitor alpha OS Canis familiaris GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|P60028|GDIA_PANTR 1 333 + 333 Gaps:3 74.27 447 61.14 1e-149 Rab GDP dissociation inhibitor alpha OS Pan troglodytes GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|P31150|GDIA_HUMAN 1 333 + 333 Gaps:3 74.27 447 61.14 1e-149 Rab GDP dissociation inhibitor alpha OS Homo sapiens GN GDI1 PE 1 SV 2
blastp_uniprot_sprot sp|P50396|GDIA_MOUSE 1 333 + 333 Gaps:3 74.27 447 61.14 2e-149 Rab GDP dissociation inhibitor alpha OS Mus musculus GN Gdi1 PE 1 SV 3
blastp_uniprot_sprot sp|P50397|GDIB_BOVIN 1 333 + 333 Gaps:3 74.61 445 60.24 5e-148 Rab GDP dissociation inhibitor beta OS Bos taurus GN GDI2 PE 2 SV 3
blastp_uniprot_sprot sp|P50395|GDIB_HUMAN 1 333 + 333 Gaps:3 74.61 445 59.94 5e-147 Rab GDP dissociation inhibitor beta OS Homo sapiens GN GDI2 PE 1 SV 2

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 51 228 178 G3DSA:3.30.519.10 none none none
Pfam 1 333 333 PF00996 none GDP dissociation inhibitor IPR018203
SUPERFAMILY 292 333 42 SSF54373 none none none
PRINTS 182 196 15 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 16 28 13 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 323 333 11 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 280 294 15 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 75 88 14 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 125 140 16 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
SUPERFAMILY 1 289 289 SSF51905 none none none
PRINTS 6 24 19 PR00891 none Rab GDI/REP protein family signature IPR018203
PRINTS 24 41 18 PR00891 none Rab GDI/REP protein family signature IPR018203
PRINTS 135 150 16 PR00891 none Rab GDI/REP protein family signature IPR018203
PRINTS 212 229 18 PR00891 none Rab GDI/REP protein family signature IPR018203
PRINTS 69 86 18 PR00891 none Rab GDI/REP protein family signature IPR018203
PRINTS 86 102 17 PR00891 none Rab GDI/REP protein family signature IPR018203
PRINTS 230 251 22 PR00891 none Rab GDI/REP protein family signature IPR018203
PANTHER 1 333 333 PTHR11787 none none none
Gene3D 229 331 103 G3DSA:3.50.50.60 none none none
Gene3D 1 50 50 G3DSA:3.50.50.60 none none none
PANTHER 1 333 333 PTHR11787:SF2 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting