Protein : Qrob_P0032380.2 Q. robur
Protein Identifier  ? Qrob_P0032380.2 Organism . Name  Quercus robur
Score  68.1 Score Type  egn
Protein Description  (M=3) K17255 - Rab GDP dissociation inhibitor Gene Prediction Quality  validated
Protein length 

Sequence

Length: 220  
Kegg Orthology  K17255
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0005093 Rab GDP-dissociation inhibitor activity Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103956055 1 189 + 189 none 42.57 444 89.42 3e-121 guanosine nucleotide diphosphate dissociation inhibitor 2
blastp_kegg lcl|cit:102625537 1 189 + 189 none 42.57 444 89.42 4e-121 rab GDP dissociation inhibitor alpha-like
blastp_kegg lcl|mdm:103456321 1 189 + 189 none 42.57 444 88.89 4e-121 guanosine nucleotide diphosphate dissociation inhibitor 2
blastp_kegg lcl|tcc:TCM_021525 1 189 + 189 none 42.57 444 88.36 7e-121 Guanosine nucleotide diphosphate dissociation inhibitor 1 isoform 1
blastp_kegg lcl|mdm:103417935 1 189 + 189 none 42.57 444 89.42 9e-121 guanosine nucleotide diphosphate dissociation inhibitor 2
blastp_kegg lcl|pmum:103341356 1 189 + 189 none 42.57 444 88.89 2e-120 guanosine nucleotide diphosphate dissociation inhibitor 1
blastp_kegg lcl|pop:POPTR_0017s00420g 1 189 + 189 none 42.57 444 89.42 2e-120 GDP dissociation inhibitor family protein
blastp_kegg lcl|cic:CICLE_v10020158mg 1 189 + 189 none 42.57 444 88.89 5e-120 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa005772mg 1 189 + 189 none 42.57 444 88.36 2e-119 hypothetical protein
blastp_kegg lcl|vvi:100261021 1 189 + 189 none 42.57 444 87.30 9e-118 rab GDP dissociation inhibitor alpha-like
blastp_pdb 1gnd_A 1 183 + 183 Gaps:1 40.72 447 51.10 3e-59 mol:protein length:447 GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR
blastp_pdb 1lv0_A 1 183 + 183 Gaps:1 40.53 449 51.10 3e-59 mol:protein length:449 RAB GDP disossociation inhibitor alpha
blastp_pdb 1d5t_A 1 183 + 183 Gaps:1 42.03 433 51.10 6e-59 mol:protein length:433 GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR
blastp_pdb 3p1w_A 1 183 + 183 Gaps:4 39.37 475 44.92 4e-49 mol:protein length:475 RabGDI protein
blastp_pdb 3cpj_G 1 178 + 178 Gaps:2 39.91 451 43.89 7e-45 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cpi_H 1 178 + 178 Gaps:2 39.91 451 43.89 7e-45 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cpi_G 1 178 + 178 Gaps:2 39.91 451 43.89 7e-45 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cph_H 1 178 + 178 Gaps:2 39.91 451 43.89 7e-45 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 3cph_G 1 178 + 178 Gaps:2 39.91 451 43.89 7e-45 mol:protein length:451 Rab GDP-dissociation inhibitor
blastp_pdb 2bcg_G 1 178 + 178 Gaps:2 39.74 453 43.89 9e-45 mol:protein length:453 Secretory pathway GDP dissociation inhibitor
blastp_uniprot_sprot sp|O97555|GDIA_CANFA 1 183 + 183 Gaps:1 40.72 447 51.10 6e-59 Rab GDP dissociation inhibitor alpha OS Canis familiaris GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|P50398|GDIA_RAT 1 183 + 183 Gaps:1 40.72 447 51.10 6e-59 Rab GDP dissociation inhibitor alpha OS Rattus norvegicus GN Gdi1 PE 1 SV 1
blastp_uniprot_sprot sp|P21856|GDIA_BOVIN 1 183 + 183 Gaps:1 40.72 447 51.10 1e-58 Rab GDP dissociation inhibitor alpha OS Bos taurus GN GDI1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7YQM0|GDIA_PONPY 1 183 + 183 Gaps:1 40.72 447 51.10 3e-58 Rab GDP dissociation inhibitor alpha OS Pongo pygmaeus GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|P50396|GDIA_MOUSE 1 183 + 183 Gaps:1 40.72 447 50.55 3e-58 Rab GDP dissociation inhibitor alpha OS Mus musculus GN Gdi1 PE 1 SV 3
blastp_uniprot_sprot sp|P60028|GDIA_PANTR 1 183 + 183 Gaps:1 40.72 447 51.10 3e-58 Rab GDP dissociation inhibitor alpha OS Pan troglodytes GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|P31150|GDIA_HUMAN 1 183 + 183 Gaps:1 40.72 447 51.10 3e-58 Rab GDP dissociation inhibitor alpha OS Homo sapiens GN GDI1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8HXX7|GDIA_MACFA 1 183 + 183 Gaps:1 40.72 447 51.10 3e-58 Rab GDP dissociation inhibitor alpha OS Macaca fascicularis GN GDI1 PE 2 SV 1
blastp_uniprot_sprot sp|O97556|GDIB_CANFA 1 183 + 183 Gaps:1 40.90 445 50.55 2e-55 Rab GDP dissociation inhibitor beta OS Canis familiaris GN GDI2 PE 2 SV 1
blastp_uniprot_sprot sp|P50395|GDIB_HUMAN 1 183 + 183 Gaps:1 40.90 445 50.00 3e-55 Rab GDP dissociation inhibitor beta OS Homo sapiens GN GDI2 PE 1 SV 2

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 183 183 PTHR11787:SF2 none none none
PANTHER 1 183 183 PTHR11787 none none none
Gene3D 27 137 111 G3DSA:3.30.519.10 none none none
PRINTS 99 117 19 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 74 90 17 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 31 45 15 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 132 151 20 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
PRINTS 153 173 21 PR00892 "Reactome:REACT_11044" Rab GDI protein signature IPR000806
SUPERFAMILY 43 140 98 SSF54373 none none none
SUPERFAMILY 141 183 43 SSF51905 none none none
Pfam 1 183 183 PF00996 none GDP dissociation inhibitor IPR018203

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting