Protein : Qrob_P0032340.2 Q. robur
Protein Identifier  ? Qrob_P0032340.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=49) PF03168 - Late embryogenesis abundant protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 312  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0009269 response to desiccation Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020871mg 5 298 + 294 none 83.52 352 80.95 4e-171 hypothetical protein
blastp_kegg lcl|cit:102624690 5 298 + 294 none 92.16 319 80.61 1e-170 uncharacterized LOC102624690
blastp_kegg lcl|pop:POPTR_0007s00300g 3 298 + 296 Gaps:5 92.68 314 81.44 4e-166 POPTRDRAFT_819645 hypothetical protein
blastp_kegg lcl|gmx:100802292 2 298 + 297 none 92.81 320 77.10 7e-165 LEA-1 late-embryogenesis abundant protein 1
blastp_kegg lcl|pvu:PHAVU_008G203600g 5 298 + 294 none 91.88 320 76.87 6e-164 hypothetical protein
blastp_kegg lcl|sot:102588697 3 298 + 296 Gaps:2 93.12 320 77.18 5e-163 uncharacterized LOC102588697
blastp_kegg lcl|tcc:TCM_021528 5 298 + 294 Gaps:7 92.28 311 81.53 7e-163 Late embryogenesis abundant protein group 2 isoform 1
blastp_kegg lcl|gmx:100800203 2 298 + 297 none 92.81 320 75.76 7e-163 uncharacterized LOC100800203
blastp_kegg lcl|gmx:100806300 2 298 + 297 Gaps:2 94.55 312 77.63 5e-162 LEA-2 desiccation-related protein At2g46140-like
blastp_kegg lcl|pvu:PHAVU_006G018100g 2 298 + 297 Gaps:2 93.65 315 77.63 1e-161 hypothetical protein
blastp_pdb 1xo8_A 28 177 + 150 Gaps:6 95.36 151 30.56 2e-15 mol:protein length:151 At1g01470
blastp_pdb 1yyc_A 54 177 + 124 none 71.26 174 26.61 2e-11 mol:protein length:174 putative late embryogenesis abundant protein
blastp_uniprot_sprot sp|P46519|LEA14_SOYBN 30 182 + 153 Gaps:6 96.71 152 28.57 3e-16 Desiccation protectant protein Lea14 homolog OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|P46518|LEA14_GOSHI 30 182 + 153 Gaps:6 97.35 151 31.29 2e-15 Late embryogenesis abundant protein Lea14-A OS Gossypium hirsutum GN LEA14-A PE 2 SV 1
blastp_uniprot_sprot sp|O03983|LEA14_ARATH 28 177 + 150 Gaps:6 95.36 151 30.56 9e-15 Probable desiccation-related protein LEA14 OS Arabidopsis thaliana GN LEA14 PE 1 SV 1
blastp_uniprot_sprot sp|P22241|DRPD_CRAPL 30 182 + 153 Gaps:14 97.35 151 29.25 2e-11 Desiccation-related protein PCC27-45 OS Craterostigma plantagineum PE 2 SV 1
blastp_uniprot_sprot sp|O82355|LEA2R_ARATH 54 177 + 124 none 74.70 166 26.61 8e-11 Desiccation-related protein At2g46140 OS Arabidopsis thaliana GN At2g46140 PE 1 SV 1
rpsblast_cdd gnl|CDD|129008 57 282 + 226 none 100.00 100 50.00 7e-18 smart00769 WHy Water Stress and Hypersensitive response.
rpsblast_cdd gnl|CDD|202564 77 295 + 219 Gaps:3 100.00 98 42.86 9e-15 pfam03168 LEA_2 Late embryogenesis abundant protein. Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511 pfam07427 has now been merged into this family.
rpsblast_cdd gnl|CDD|35167 46 158 + 113 Gaps:1 70.81 161 24.56 2e-07 COG5608 COG5608 Conserved secreted protein [Function unknown].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 298 298 PTHR31459:SF2 none none none
PANTHER 1 298 298 PTHR31459 none none none
Pfam 202 295 94 PF03168 none Late embryogenesis abundant protein IPR004864
Pfam 77 172 96 PF03168 none Late embryogenesis abundant protein IPR004864
Gene3D 181 294 114 G3DSA:2.60.40.10 none none IPR013783
Gene3D 59 180 122 G3DSA:2.60.40.10 none none IPR013783
ProDom 36 181 146 PD010978 none LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE none
SMART 56 173 118 SM00769 none Water Stress and Hypersensitive response IPR013990
SMART 182 298 117 SM00769 none Water Stress and Hypersensitive response IPR013990
SUPERFAMILY 177 303 127 SSF117070 none none none
SUPERFAMILY 41 182 142 SSF117070 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting