Protein : Qrob_P0032270.2 Q. robur
Protein Identifier  ? Qrob_P0032270.2 Organism . Name  Quercus robur
Score  49.9 Score Type  egn
Protein Description  (M=49) PF03168 - Late embryogenesis abundant protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 357  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0009269 response to desiccation Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020871mg 41 344 + 304 none 86.36 352 83.55 0.0 hypothetical protein
blastp_kegg lcl|cit:102624690 41 343 + 303 none 94.98 319 83.17 0.0 uncharacterized LOC102624690
blastp_kegg lcl|pop:POPTR_0007s00300g 41 343 + 303 Gaps:5 94.90 314 83.89 2e-176 POPTRDRAFT_819645 hypothetical protein
blastp_kegg lcl|tcc:TCM_021528 41 344 + 304 Gaps:7 95.50 311 84.18 1e-175 Late embryogenesis abundant protein group 2 isoform 1
blastp_kegg lcl|gmx:100806300 41 351 + 311 Gaps:3 98.72 312 80.19 4e-175 LEA-2 desiccation-related protein At2g46140-like
blastp_kegg lcl|pxb:103935626 38 343 + 306 none 95.92 319 81.05 1e-174 uncharacterized LOC103935626
blastp_kegg lcl|sot:102588697 41 343 + 303 Gaps:2 95.31 320 79.34 3e-173 uncharacterized LOC102588697
blastp_kegg lcl|pvu:PHAVU_008G203600g 41 339 + 299 none 93.44 320 78.93 6e-172 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa008531mg 38 343 + 306 Gaps:5 94.82 328 77.49 1e-171 hypothetical protein
blastp_kegg lcl|gmx:100802292 23 349 + 327 Gaps:18 96.56 320 80.26 1e-171 LEA-1 late-embryogenesis abundant protein 1
blastp_pdb 1xo8_A 65 214 + 150 Gaps:6 95.36 151 31.25 3e-16 mol:protein length:151 At1g01470
blastp_pdb 1yyc_A 54 214 + 161 Gaps:6 89.08 174 29.03 4e-14 mol:protein length:174 putative late embryogenesis abundant protein
blastp_uniprot_sprot sp|P46518|LEA14_GOSHI 67 219 + 153 Gaps:6 97.35 151 34.01 3e-18 Late embryogenesis abundant protein Lea14-A OS Gossypium hirsutum GN LEA14-A PE 2 SV 1
blastp_uniprot_sprot sp|P46519|LEA14_SOYBN 67 219 + 153 Gaps:6 96.71 152 30.61 4e-18 Desiccation protectant protein Lea14 homolog OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|O03983|LEA14_ARATH 65 214 + 150 Gaps:6 95.36 151 31.25 1e-15 Probable desiccation-related protein LEA14 OS Arabidopsis thaliana GN LEA14 PE 1 SV 1
blastp_uniprot_sprot sp|O82355|LEA2R_ARATH 54 214 + 161 Gaps:6 93.37 166 29.03 1e-13 Desiccation-related protein At2g46140 OS Arabidopsis thaliana GN At2g46140 PE 1 SV 1
blastp_uniprot_sprot sp|P22241|DRPD_CRAPL 67 219 + 153 Gaps:14 97.35 151 31.29 2e-13 Desiccation-related protein PCC27-45 OS Craterostigma plantagineum PE 2 SV 1
rpsblast_cdd gnl|CDD|129008 94 319 + 226 none 100.00 100 49.00 1e-19 smart00769 WHy Water Stress and Hypersensitive response.
rpsblast_cdd gnl|CDD|202564 114 334 + 221 Gaps:3 100.00 98 43.88 1e-17 pfam03168 LEA_2 Late embryogenesis abundant protein. Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511 pfam07427 has now been merged into this family.
rpsblast_cdd gnl|CDD|35167 83 195 + 113 Gaps:1 70.81 161 27.19 1e-09 COG5608 COG5608 Conserved secreted protein [Function unknown].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 26 354 329 PTHR31459 none none none
Gene3D 218 348 131 G3DSA:2.60.40.10 none none IPR013783
Gene3D 96 217 122 G3DSA:2.60.40.10 none none IPR013783
Pfam 239 334 96 PF03168 none Late embryogenesis abundant protein IPR004864
Pfam 114 209 96 PF03168 none Late embryogenesis abundant protein IPR004864
SUPERFAMILY 214 343 130 SSF117070 none none none
SUPERFAMILY 78 219 142 SSF117070 none none none
PANTHER 26 354 329 PTHR31459:SF2 none none none
SMART 219 335 117 SM00769 none Water Stress and Hypersensitive response IPR013990
SMART 93 210 118 SM00769 none Water Stress and Hypersensitive response IPR013990
ProDom 73 218 146 PD010978 none LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting