Protein : Qrob_P0032250.2 Q. robur
Protein Identifier  ? Qrob_P0032250.2 Organism . Name  Quercus robur
Score  34.3 Score Type  egn
Protein Description  (M=2) PTHR22572//PTHR22572:SF79 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // SUBFAMILY NOT NAMED (PTHR22572:SF79) Code Enzyme  EC:2.7.7.27
Gene Prediction Quality  validated Protein length 

Sequence

Length: 532  
Kegg Orthology  K00975
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016779 nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0007s00320g 1 531 + 531 Gaps:45 100.00 488 68.44 0.0 POPTRDRAFT_216015 hypothetical protein
blastp_kegg lcl|pop:POPTR_0017s00370g 1 531 + 531 Gaps:50 90.45 534 69.77 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10023789mg 1 531 + 531 Gaps:57 100.00 476 67.65 0.0 hypothetical protein
blastp_kegg lcl|cit:102620134 1 531 + 531 Gaps:47 100.00 490 66.73 0.0 glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic-like
blastp_kegg lcl|rcu:RCOM_0211400 53 531 + 479 Gaps:52 89.60 481 72.16 0.0 glucose-1-phosphate adenylyltransferase putative (EC:2.7.7.27)
blastp_kegg lcl|tcc:TCM_021530 4 531 + 528 Gaps:50 98.20 499 68.16 0.0 Glucose-1-phosphate adenylyltransferase
blastp_kegg lcl|vvi:100262934 35 531 + 497 Gaps:52 93.37 483 69.84 0.0 glucose-1-phosphate adenylyltransferase small subunit 1 chloroplastic-like
blastp_kegg lcl|mdm:103400295 1 531 + 531 Gaps:52 100.00 491 64.36 0.0 glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic-like
blastp_kegg lcl|pxb:103935632 1 531 + 531 Gaps:52 100.00 491 64.15 0.0 glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic-like
blastp_kegg lcl|pper:PRUPE_ppa019426mg 1 531 + 531 Gaps:53 100.00 490 66.53 0.0 hypothetical protein
blastp_pdb 1yp4_D 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp4_C 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp4_B 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp4_A 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_D 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_C 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_B 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_A 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp2_D 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp2_C 75 531 + 457 Gaps:41 93.13 451 52.14 6e-141 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_uniprot_sprot sp|Q9M462|GLGS_BRANA 12 531 + 520 Gaps:47 91.73 520 48.43 8e-141 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic OS Brassica napus GN AGPS1 PE 2 SV 1
blastp_uniprot_sprot sp|P52416|GLGS1_VICFA 30 531 + 502 Gaps:46 90.94 508 50.65 2e-140 Glucose-1-phosphate adenylyltransferase small subunit 1 chloroplastic OS Vicia faba GN AGPC PE 2 SV 1
blastp_uniprot_sprot sp|P23509|GLGS_SOLTU 75 531 + 457 Gaps:41 80.61 521 52.14 1e-139 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P55238|GLGS_HORVU 75 531 + 457 Gaps:41 81.87 513 51.43 7e-139 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P55228|GLGS_ARATH 75 531 + 457 Gaps:41 80.77 520 50.95 9e-139 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic OS Arabidopsis thaliana GN APS1 PE 2 SV 2
blastp_uniprot_sprot sp|P30523|GLGS_WHEAT 46 531 + 486 Gaps:42 95.14 473 49.11 2e-138 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Triticum aestivum GN AGP-S PE 2 SV 1
blastp_uniprot_sprot sp|P15280|GLGS_ORYSJ 75 531 + 457 Gaps:41 81.71 514 51.90 2e-138 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Oryza sativa subsp. japonica GN AGPS PE 2 SV 4
blastp_uniprot_sprot sp|Q42882|GLGS_SOLLC 75 531 + 457 Gaps:41 80.61 521 51.90 1e-137 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|P52417|GLGS2_VICFA 75 531 + 457 Gaps:41 82.03 512 50.71 1e-136 Glucose-1-phosphate adenylyltransferase small subunit 2 chloroplastic OS Vicia faba GN AGPP PE 2 SV 1
blastp_uniprot_sprot sp|P55232|GLGS_BETVU 75 531 + 457 Gaps:53 83.44 489 51.47 6e-131 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic (Fragment) OS Beta vulgaris GN AGPB1 PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 291 372 82 SSF53448 none none IPR029044
SUPERFAMILY 409 447 39 SSF53448 none none IPR029044
SUPERFAMILY 66 241 176 SSF53448 none none IPR029044
SUPERFAMILY 395 531 137 SSF51161 none none IPR011004
PANTHER 292 531 240 PTHR22572:SF79 none none none
PANTHER 47 243 197 PTHR22572 none none none
Pfam 66 369 304 PF00483 "Reactome:REACT_17015" Nucleotidyl transferase IPR005835
Gene3D 294 446 153 G3DSA:3.90.550.10 none none IPR029044
Gene3D 66 253 188 G3DSA:3.90.550.10 none none IPR029044
PANTHER 47 243 197 PTHR22572:SF79 none none none
PANTHER 292 531 240 PTHR22572 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8

0 Targeting