Protein : Qrob_P0032210.2 Q. robur
Protein Identifier  ? Qrob_P0032210.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 3.2.1.143 - Poly(ADP-ribose) glycohydrolase. Code Enzyme  EC:3.2.1.143
Gene Prediction Quality  validated Protein length 

Sequence

Length: 567  
Kegg Orthology  K07759
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004649 poly(ADP-ribose) glycohydrolase activity Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103341348 1 563 + 563 Gaps:8 99.47 566 76.02 0.0 poly(ADP-ribose) glycohydrolase 1-like
blastp_kegg lcl|pxb:103935622 1 566 + 566 Gaps:6 100.00 564 72.34 0.0 poly(ADP-ribose) glycohydrolase 1-like
blastp_kegg lcl|vvi:100249056 1 564 + 564 Gaps:2 100.00 562 70.64 0.0 poly(ADP-ribose) glycohydrolase 1-like
blastp_kegg lcl|rcu:RCOM_0211520 1 558 + 558 Gaps:19 99.28 553 69.58 0.0 poly(ADP-ribose) glycohydrolase putative (EC:3.2.1.143)
blastp_kegg lcl|tcc:TCM_021532 1 552 + 552 Gaps:10 98.21 558 68.43 0.0 Poly (ADP-ribose) glycohydrolase (PARG) putative isoform 1
blastp_kegg lcl|fve:101305789 1 561 + 561 Gaps:52 100.00 511 72.60 0.0 poly(ADP-ribose) glycohydrolase 1-like
blastp_kegg lcl|sot:102600760 1 561 + 561 Gaps:8 98.22 563 65.10 0.0 poly(ADP-ribose) glycohydrolase 1-like
blastp_kegg lcl|pper:PRUPE_ppa004452mg 1 509 + 509 Gaps:8 100.00 509 76.23 0.0 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10022947mg 1 552 + 552 Gaps:17 98.53 543 66.36 0.0 hypothetical protein
blastp_kegg lcl|sot:102586728 1 561 + 561 Gaps:4 99.11 562 64.63 0.0 poly(ADP-ribose) glycohydrolase 1-like
blastp_uniprot_sprot sp|Q9SKB3|PARG1_ARATH 1 552 + 552 Gaps:14 98.18 548 64.68 0.0 Poly(ADP-ribose) glycohydrolase 1 OS Arabidopsis thaliana GN PARG1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8VYA1|PARG2_ARATH 1 552 + 552 Gaps:34 99.62 522 58.27 0.0 Probable poly(ADP-ribose) glycohydrolase 2 OS Arabidopsis thaliana GN PARG2 PE 2 SV 1
blastp_uniprot_sprot sp|O46043|PARG_DROME 80 532 + 453 Gaps:46 47.01 768 43.49 3e-53 Poly(ADP-ribose) glycohydrolase OS Drosophila melanogaster GN Parg PE 1 SV 2
blastp_uniprot_sprot sp|Q86W56|PARG_HUMAN 80 553 + 474 Gaps:37 38.73 976 37.57 7e-46 Poly(ADP-ribose) glycohydrolase OS Homo sapiens GN PARG PE 1 SV 1
blastp_uniprot_sprot sp|O88622|PARG_MOUSE 80 563 + 484 Gaps:40 40.35 969 36.83 2e-45 Poly(ADP-ribose) glycohydrolase OS Mus musculus GN Parg PE 1 SV 2
blastp_uniprot_sprot sp|O02776|PARG_BOVIN 80 553 + 474 Gaps:37 38.69 977 37.04 9e-45 Poly(ADP-ribose) glycohydrolase OS Bos taurus GN PARG PE 1 SV 1
blastp_uniprot_sprot sp|Q9QYM2|PARG_RAT 80 384 + 305 Gaps:35 28.81 972 37.14 5e-44 Poly(ADP-ribose) glycohydrolase OS Rattus norvegicus GN Parg PE 1 SV 1
blastp_uniprot_sprot sp|Q867X0|PME3_CAEEL 194 528 + 335 Gaps:38 34.70 781 39.85 2e-20 Poly(ADP-ribose) glycohydrolase pme-3 OS Caenorhabditis elegans GN pme-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9N5L4|PME4_CAEEL 194 383 + 190 Gaps:20 40.00 485 35.57 1e-19 Poly(ADP-ribose) glycohydrolase pme-4 OS Caenorhabditis elegans GN pme-4 PE 2 SV 2
rpsblast_cdd gnl|CDD|191169 81 509 + 429 Gaps:27 100.00 339 61.36 1e-114 pfam05028 PARG_cat Poly (ADP-ribose) glycohydrolase (PARG). Poly(ADP-ribose) glycohydrolase (PARG) is a ubiquitously expressed exo- and endoglycohydrolase which mediates oxidative and excitotoxic neuronal death.
rpsblast_kog gnl|CDD|37275 1 532 + 532 Gaps:72 93.62 517 40.70 1e-105 KOG2064 KOG2064 KOG2064 Poly(ADP-ribose) glycohydrolase [Signal transduction mechanisms].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 17 549 533 PTHR12837 none none IPR007724
Pfam 81 508 428 PF05028 none Poly (ADP-ribose) glycohydrolase (PARG) IPR007724
PANTHER 17 549 533 PTHR12837:SF0 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8

0 Targeting