Protein : Qrob_P0030280.2 Q. robur
Protein Identifier  ? Qrob_P0030280.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=8) K14611 - solute carrier family 23 (nucleobase transporter), member 1/2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 534  
Kegg Orthology  K14611
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103953499 1 533 + 533 none 100.00 533 90.24 0.0 nucleobase-ascorbate transporter 6-like
blastp_kegg lcl|pxb:103950945 1 533 + 533 none 100.00 533 90.24 0.0 nucleobase-ascorbate transporter 6-like
blastp_kegg lcl|pmum:103343328 1 533 + 533 none 100.00 533 90.43 0.0 nucleobase-ascorbate transporter 6-like
blastp_kegg lcl|mdm:103451928 1 533 + 533 none 100.00 533 90.06 0.0 nucleobase-ascorbate transporter 6-like
blastp_kegg lcl|mdm:103402982 1 533 + 533 none 100.00 533 90.24 0.0 nucleobase-ascorbate transporter 6-like
blastp_kegg lcl|pper:PRUPE_ppa004044mg 1 533 + 533 none 100.00 533 90.24 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10031192mg 2 533 + 532 none 99.44 535 89.66 0.0 hypothetical protein
blastp_kegg lcl|cit:102622776 2 533 + 532 none 99.44 535 89.66 0.0 nucleobase-ascorbate transporter 7-like
blastp_kegg lcl|gmx:100776272 1 533 + 533 none 100.00 533 88.93 0.0 nucleobase-ascorbate transporter 6-like
blastp_kegg lcl|tcc:TCM_010231 8 533 + 526 none 98.13 536 90.49 0.0 Nucleobase-ascorbate transporter 7
blastp_pdb 3qe7_A 268 415 + 148 Gaps:10 33.57 429 29.86 4e-07 mol:protein length:429 Uracil permease
blastp_uniprot_sprot sp|Q27GI3|NAT6_ARATH 1 533 + 533 Gaps:1 100.00 532 83.27 0.0 Nucleobase-ascorbate transporter 6 OS Arabidopsis thaliana GN NAT6 PE 2 SV 2
blastp_uniprot_sprot sp|Q0WPE9|NAT7_ARATH 7 533 + 527 none 97.96 538 81.78 0.0 Nucleobase-ascorbate transporter 7 OS Arabidopsis thaliana GN NAT7 PE 2 SV 2
blastp_uniprot_sprot sp|Q8RWE9|NAT5_ARATH 9 533 + 525 none 99.43 528 79.81 0.0 Nucleobase-ascorbate transporter 5 OS Arabidopsis thaliana GN NAT5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZQ5|NAT8_ARATH 1 532 + 532 Gaps:6 99.81 539 72.49 0.0 Nucleobase-ascorbate transporter 8 OS Arabidopsis thaliana GN NAT8 PE 2 SV 1
blastp_uniprot_sprot sp|P93039|NAT4_ARATH 11 532 + 522 none 99.24 526 60.15 0.0 Nucleobase-ascorbate transporter 4 OS Arabidopsis thaliana GN NAT4 PE 2 SV 2
blastp_uniprot_sprot sp|Q41760|LPE1_MAIZE 8 533 + 526 none 99.81 527 57.03 0.0 Nucleobase-ascorbate transporter LPE1 OS Zea mays GN LPE1 PE 1 SV 2
blastp_uniprot_sprot sp|Q94C70|NAT2_ARATH 11 531 + 521 Gaps:3 98.85 524 58.11 0.0 Nucleobase-ascorbate transporter 2 OS Arabidopsis thaliana GN NAT2 PE 2 SV 2
blastp_uniprot_sprot sp|O04472|NAT10_ARATH 11 532 + 522 Gaps:9 97.41 541 55.98 0.0 Putative nucleobase-ascorbate transporter 10 OS Arabidopsis thaliana GN NAT10 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SHZ3|NAT1_ARATH 18 531 + 514 Gaps:5 98.65 520 54.97 0.0 Nucleobase-ascorbate transporter 1 OS Arabidopsis thaliana GN NAT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GZD4|NAT3_ARATH 19 532 + 514 Gaps:1 93.10 551 48.93 1e-169 Nucleobase-ascorbate transporter 3 OS Arabidopsis thaliana GN NAT3 PE 2 SV 2
rpsblast_cdd gnl|CDD|201477 38 443 + 406 Gaps:35 99.49 389 30.23 2e-47 pfam00860 Xan_ur_permease Permease family. This family includes permeases for diverse substrates such as xanthine uracil and vitamin C. However many members of this family are functionally uncharacterized and may transport other substrates. Members of this family have ten predicted transmembrane helices.
rpsblast_cdd gnl|CDD|32414 34 447 + 414 Gaps:58 87.36 451 27.41 3e-41 COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism].
rpsblast_cdd gnl|CDD|188293 44 437 + 394 Gaps:61 90.39 406 30.52 3e-38 TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine GenProp0696 ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640 GenProp0688 GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
rpsblast_cdd gnl|CDD|200049 35 439 + 405 Gaps:52 92.48 412 28.61 8e-31 TIGR00801 ncs2 uracil-xanthine permease. The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40) Most of the functionally characterized members of the NCS2 family are transporters specific for nucleobases including both purines and pyrimidines. However two closely related rat members of the family SVCT1 and SVCT2 localized to different tissues of the body cotransport L-ascorbate and Na+ with a high degree of specificity and high affinity for the vitamin. The NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
rpsblast_cdd gnl|CDD|182675 35 415 + 381 Gaps:75 79.91 428 26.32 3e-14 PRK10720 PRK10720 uracil transporter Provisional.
rpsblast_cdd gnl|CDD|132655 36 411 + 376 Gaps:55 79.49 429 26.69 4e-11 TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
rpsblast_cdd gnl|CDD|183124 39 445 + 407 Gaps:51 90.53 433 21.17 6e-08 PRK11412 PRK11412 putative uracil/xanthine transporter Provisional.
rpsblast_kog gnl|CDD|36506 27 533 + 507 Gaps:17 99.61 510 58.46 0.0 KOG1292 KOG1292 KOG1292 Xanthine/uracil transporters [Nucleotide transport and metabolism].

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 470 488 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 3 532 530 PTHR11119 none none IPR006043
Phobius 215 225 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 76 94 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 416 426 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 397 415 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 65 75 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 140 158 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 444 469 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 311 329 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 164 184 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 185 195 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 100 119 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 159 163 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 352 371 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 196 214 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 330 351 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 45 64 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 392 396 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 247 288 42 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 3 532 530 PTHR11119:SF3 none none IPR029949
Phobius 226 246 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 95 99 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 39 443 405 PF00860 none Permease family IPR006043
Phobius 289 310 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 427 443 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 372 391 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 120 139 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 44 44 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 489 533 45 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

13 Localization

Analysis Start End Length
TMHMM 370 389 19
TMHMM 427 449 22
TMHMM 76 95 19
TMHMM 393 415 22
TMHMM 41 63 22
TMHMM 224 246 22
TMHMM 168 190 22
TMHMM 290 312 22
TMHMM 100 119 19
TMHMM 140 158 18
TMHMM 327 349 22
TMHMM 469 488 19
TMHMM 195 214 19

0 Qtllist

0 Targeting