Protein : Qrob_P0030010.2 Q. robur
Protein Identifier  ? Qrob_P0030010.2 Organism . Name  Quercus robur
Score  70.1 Score Type  egn
Protein Description  (M=1) K01056 - peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Code Enzyme  EC:3.1.1.29
Gene Prediction Quality  validated Protein length 

Sequence

Length: 339  
Kegg Orthology  K01056
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0004045 aminoacyl-tRNA hydrolase activity Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa010513mg 10 338 + 329 Gaps:21 100.00 247 76.92 8e-132 hypothetical protein
blastp_kegg lcl|pmum:103342667 10 338 + 329 Gaps:21 100.00 247 75.71 8e-128 chloroplastic group IIB intron splicing facilitator CRS2-B chloroplastic
blastp_kegg lcl|tcc:TCM_019422 10 338 + 329 Gaps:27 100.00 244 77.87 1e-127 Peptidyl-tRNA hydrolase family protein isoform 1
blastp_kegg lcl|pxb:103937466 10 338 + 329 Gaps:21 100.00 247 75.71 2e-126 chloroplastic group IIB intron splicing facilitator CRS2-B chloroplastic-like
blastp_kegg lcl|pop:POPTR_0004s09730g 10 338 + 329 Gaps:27 100.00 244 75.82 2e-124 POPTRDRAFT_648034 peptidyl-tRNA hydrolase family protein
blastp_kegg lcl|cmo:103500129 5 338 + 334 Gaps:36 100.00 250 75.60 3e-122 chloroplastic group IIB intron splicing facilitator CRS2-B chloroplastic
blastp_kegg lcl|cit:102607369 10 338 + 329 Gaps:27 100.00 244 75.82 8e-122 chloroplastic group IIB intron splicing facilitator CRS2-A chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10012586mg 10 338 + 329 Gaps:26 100.00 243 75.31 3e-120 hypothetical protein
blastp_kegg lcl|csv:101204795 38 338 + 301 Gaps:23 88.35 249 80.00 1e-117 chloroplastic group IIB intron splicing facilitator CRS2-B chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_008G007300g 10 338 + 329 Gaps:21 100.00 247 70.04 1e-116 hypothetical protein
blastp_pdb 1rym_A 57 338 + 282 Gaps:21 94.34 212 69.00 2e-92 mol:protein length:212 protein CRS2
blastp_pdb 1ryb_A 55 331 + 277 Gaps:21 95.12 205 68.72 2e-88 mol:protein length:205 CRS2
blastp_pdb 1ryn_A 57 334 + 278 Gaps:30 97.03 202 67.35 5e-86 mol:protein length:202 protein CRS2
blastp_pdb 3td6_A 156 321 + 166 Gaps:23 93.72 191 37.43 3e-22 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3td2_A 156 321 + 166 Gaps:23 93.72 191 37.43 3e-22 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3tcn_B 156 321 + 166 Gaps:23 93.72 191 37.43 3e-22 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3tcn_A 156 321 + 166 Gaps:23 93.72 191 37.43 3e-22 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 3tck_A 156 321 + 166 Gaps:23 93.72 191 37.43 3e-22 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 2z2k_A 156 321 + 166 Gaps:23 93.72 191 37.43 3e-22 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_pdb 2z2j_B 156 321 + 166 Gaps:23 93.72 191 37.43 3e-22 mol:protein length:191 Peptidyl-tRNA hydrolase
blastp_uniprot_sprot sp|Q9LF14|CRS2B_ARATH 20 338 + 319 Gaps:35 99.17 240 66.39 1e-100 Chloroplastic group IIB intron splicing facilitator CRS2-B chloroplastic OS Arabidopsis thaliana GN CRS2B PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKN4|CRS2A_ARATH 10 338 + 329 Gaps:28 100.00 246 63.82 1e-97 Chloroplastic group IIB intron splicing facilitator CRS2-A chloroplastic OS Arabidopsis thaliana GN CRS2A PE 2 SV 1
blastp_uniprot_sprot sp|Q9M5P4|CRS2_MAIZE 11 338 + 328 Gaps:44 99.22 256 60.63 4e-95 Chloroplastic group IIB intron splicing facilitator CRS2 chloroplastic OS Zea mays GN CRS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5ZCL8|CRS2_ORYSJ 10 338 + 329 Gaps:36 100.00 259 59.46 6e-95 Chloroplastic group IIB intron splicing facilitator CRS2 chloroplastic OS Oryza sativa subsp. japonica GN Os01g0132800 PE 2 SV 1
blastp_uniprot_sprot sp|Q6NLS8|PTHM_ARATH 59 337 + 279 Gaps:21 89.95 219 52.28 1e-63 Peptidyl-tRNA hydrolase mitochondrial OS Arabidopsis thaliana GN At5g19830 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GW64|PTHC_ARATH 47 328 + 282 Gaps:21 69.44 288 50.00 1e-61 Peptidyl-tRNA hydrolase chloroplastic OS Arabidopsis thaliana GN At1g18440 PE 2 SV 2
blastp_uniprot_sprot sp|Q5N9Q7|PTHM_ORYSJ 61 331 + 271 Gaps:21 75.60 250 51.32 7e-59 Peptidyl-tRNA hydrolase mitochondrial OS Oryza sativa subsp. japonica GN Os01g0693900 PE 2 SV 1
blastp_uniprot_sprot sp|Q181A2|PTH_CLOD6 62 328 + 267 Gaps:22 98.92 186 39.67 7e-40 Peptidyl-tRNA hydrolase OS Clostridium difficile (strain 630) GN pth PE 3 SV 1
blastp_uniprot_sprot sp|B8G3X3|PTH_CHLAD 62 328 + 267 Gaps:25 98.40 188 40.00 1e-37 Peptidyl-tRNA hydrolase OS Chloroflexus aggregans (strain MD-66 / DSM 9485) GN pth PE 3 SV 1
blastp_uniprot_sprot sp|B9LE93|PTH_CHLSY 62 328 + 267 Gaps:23 98.40 188 36.76 2e-35 Peptidyl-tRNA hydrolase OS Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN pth PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 245 255 11 PS01196 none Peptidyl-tRNA hydrolase signature 2. IPR018171
ProSitePatterns 74 87 14 PS01195 none Peptidyl-tRNA hydrolase signature 1. IPR018171
Pfam 227 328 102 PF01195 none Peptidyl-tRNA hydrolase IPR001328
Pfam 63 100 38 PF01195 none Peptidyl-tRNA hydrolase IPR001328
Pfam 158 228 71 PF01195 none Peptidyl-tRNA hydrolase IPR001328
PANTHER 100 337 238 PTHR17224 none none IPR001328
PANTHER 100 337 238 PTHR17224:SF3 none none none
ProSitePatterns 169 182 14 PS01195 none Peptidyl-tRNA hydrolase signature 1. IPR018171
SUPERFAMILY 155 328 174 SSF53178 none none IPR001328
Gene3D 150 328 179 G3DSA:3.40.50.1470 none none IPR001328
Gene3D 55 112 58 G3DSA:3.40.50.1470 none none IPR001328
SUPERFAMILY 60 114 55 SSF53178 none none IPR001328

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 13   Mitochondrion 4 0.142 0.559 NON-PLANT 13