Protein : Qrob_P0028380.2 Q. robur
Protein Identifier  ? Qrob_P0028380.2 Organism . Name  Quercus robur
Score  91.3 Score Type  egn
Protein Description  (M=2) PTHR31490:SF2 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN (PTHR31490:SF2) Code Enzyme  EC:3.2.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 520  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101309796 40 519 + 480 Gaps:15 82.49 571 69.85 0.0 endo-1 4-beta-xylanase A-like
blastp_kegg lcl|cit:102624641 40 517 + 478 Gaps:14 84.94 551 67.74 0.0 uncharacterized LOC102624641
blastp_kegg lcl|cic:CICLE_v10028089mg 40 517 + 478 Gaps:14 80.97 578 67.31 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s09090g 40 518 + 479 Gaps:14 81.57 575 68.02 0.0 POPTRDRAFT_878977 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa024827mg 40 519 + 480 Gaps:14 82.46 570 67.66 0.0 hypothetical protein
blastp_kegg lcl|pxb:103964472 28 519 + 492 Gaps:21 94.69 508 68.19 0.0 uncharacterized LOC103964472
blastp_kegg lcl|pmum:103335087 36 517 + 482 Gaps:14 82.66 571 67.37 0.0 uncharacterized LOC103335087
blastp_kegg lcl|mdm:103436117 40 519 + 480 Gaps:15 81.77 576 67.73 0.0 uncharacterized LOC103436117
blastp_kegg lcl|rcu:RCOM_0834660 40 518 + 479 Gaps:15 85.09 550 66.24 0.0 hydrolase hydrolyzing O-glycosyl compounds putative (EC:3.2.1.8)
blastp_kegg lcl|tcc:TCM_007234 40 517 + 478 Gaps:14 79.59 588 65.81 0.0 Glycosyl hydrolase family 10 protein putative
blastp_pdb 1tux_A 149 457 + 309 Gaps:32 100.00 301 29.24 6e-24 mol:protein length:301 XYLANASE
blastp_pdb 1k6a_A 163 418 + 256 Gaps:17 84.16 303 29.02 6e-24 mol:protein length:303 xylanase I
blastp_pdb 1gor_A 150 418 + 269 Gaps:20 89.44 303 28.78 6e-24 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_pdb 1goq_A 150 418 + 269 Gaps:20 89.44 303 28.78 6e-24 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_pdb 1goo_A 150 418 + 269 Gaps:20 89.44 303 28.78 6e-24 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_pdb 1gom_A 150 418 + 269 Gaps:20 89.44 303 28.78 6e-24 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_pdb 1gok_A 150 418 + 269 Gaps:20 89.44 303 28.78 6e-24 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_pdb 1i1x_A 163 418 + 256 Gaps:17 84.16 303 28.24 5e-23 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_pdb 1i1w_A 163 418 + 256 Gaps:17 84.16 303 28.24 5e-23 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_pdb 2bnj_A 163 418 + 256 Gaps:17 84.16 303 28.24 8e-23 mol:protein length:303 ENDO-1 4-BETA-XYLANASE
blastp_uniprot_sprot sp|Q0H904|XYNC_ASPFU 163 401 + 239 Gaps:17 73.23 325 28.57 5e-24 Endo-1 4-beta-xylanase C OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN xlnC PE 2 SV 2
blastp_uniprot_sprot sp|P23360|XYNA_THEAU 163 418 + 256 Gaps:17 77.51 329 29.02 2e-23 Endo-1 4-beta-xylanase OS Thermoascus aurantiacus GN XYNA PE 1 SV 4
blastp_uniprot_sprot sp|B0Y6E0|XYNC_ASPFC 163 401 + 239 Gaps:26 72.47 316 29.26 7e-22 Probable endo-1 4-beta-xylanase C OS Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN xlnC PE 2 SV 2
blastp_uniprot_sprot sp|A1CX14|XYNC_NEOFI 163 401 + 239 Gaps:27 72.61 314 30.26 3e-21 Probable endo-1 4-beta-xylanase C OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN xlnC PE 2 SV 1
blastp_uniprot_sprot sp|A1CHQ0|XYNC_ASPCL 185 416 + 232 Gaps:29 70.35 317 32.74 2e-20 Probable endo-1 4-beta-xylanase C OS Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN xlnC PE 2 SV 1
blastp_uniprot_sprot sp|Q00177|XYNC_EMENI 163 416 + 254 Gaps:19 77.98 327 29.41 2e-20 Endo-1 4-beta-xylanase C OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN xlnC PE 1 SV 1
blastp_uniprot_sprot sp|Q0CBM8|XYNC_ASPTN 163 401 + 239 Gaps:19 73.01 326 29.83 7e-20 Probable endo-1 4-beta-xylanase C OS Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN xlnC PE 2 SV 2
blastp_uniprot_sprot sp|Q4JHP5|XYNC_ASPTE 163 401 + 239 Gaps:19 73.01 326 29.83 8e-20 Probable endo-1 4-beta-xylanase C OS Aspergillus terreus GN xlnC PE 2 SV 1
blastp_uniprot_sprot sp|P26514|XYNA_STRLI 163 386 + 224 Gaps:24 46.96 477 29.02 9e-20 Endo-1 4-beta-xylanase A OS Streptomyces lividans GN xlnA PE 1 SV 2
blastp_uniprot_sprot sp|Q12603|XYNA_DICTH 137 394 + 258 Gaps:18 72.73 352 25.39 2e-19 Beta-1 4-xylanase OS Dictyoglomus thermophilum GN xynA PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 137 491 355 G3DSA:3.20.20.80 none none IPR013781
PANTHER 40 519 480 PTHR31490:SF2 none none none
Pfam 156 426 271 PF00331 "MetaCyc:PWY-6784","UniPathway:UPA00114" Glycosyl hydrolase family 10 IPR001000
Gene3D 40 116 77 G3DSA:2.60.120.260 none none IPR008979
SUPERFAMILY 150 462 313 SSF51445 none none IPR017853
PANTHER 40 519 480 PTHR31490 none none none
SMART 194 457 264 SM00633 "MetaCyc:PWY-6784","UniPathway:UPA00114" Glycosyl hydrolase family 10 IPR001000

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting