Protein : Qrob_P0026840.2 Q. robur
Protein Identifier  ? Qrob_P0026840.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR22880:SF137 - GH11602P (PTHR22880:SF137) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1605  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103333472 42 1598 + 1557 Gaps:191 98.62 1521 57.67 0.0 uncharacterized LOC103333472
blastp_kegg lcl|tcc:TCM_025557 4 1604 + 1601 Gaps:195 99.19 1474 55.06 0.0 RING/FYVE/PHD zinc finger superfamily protein putative isoform 1
blastp_kegg lcl|mdm:103445016 42 1598 + 1557 Gaps:223 97.97 1478 55.73 0.0 uncharacterized LOC103445016
blastp_kegg lcl|pxb:103951480 42 1598 + 1557 Gaps:222 97.95 1463 55.48 0.0 uncharacterized LOC103951480
blastp_kegg lcl|mdm:103440032 28 1598 + 1571 Gaps:232 99.31 1459 55.14 0.0 uncharacterized LOC103440032
blastp_kegg lcl|pxb:103940526 42 1598 + 1557 Gaps:241 99.59 1468 55.06 0.0 uncharacterized LOC103940526
blastp_kegg lcl|pop:POPTR_0013s07550g 2 1598 + 1597 Gaps:103 95.08 1586 56.50 0.0 POPTRDRAFT_663278 hypothetical protein
blastp_kegg lcl|cit:102623421 2 1604 + 1603 Gaps:183 92.76 1658 54.55 0.0 uncharacterized LOC102623421
blastp_kegg lcl|fve:101314703 86 1598 + 1513 Gaps:209 99.63 1361 53.61 0.0 uncharacterized protein LOC101314703
blastp_kegg lcl|gmx:100784908 55 1604 + 1550 Gaps:209 100.00 1411 50.25 0.0 uncharacterized LOC100784908
blastp_pdb 1f62_A 361 409 + 49 Gaps:1 94.12 51 39.58 9e-06 mol:protein length:51 TRANSCRIPTION FACTOR WSTF
blastp_uniprot_sprot sp|Q9NRL2|BAZ1A_HUMAN 361 407 + 47 Gaps:1 2.96 1556 47.83 1e-06 Bromodomain adjacent to zinc finger domain protein 1A OS Homo sapiens GN BAZ1A PE 1 SV 2
blastp_uniprot_sprot sp|A6H619|PHRF1_MOUSE 355 406 + 52 Gaps:1 3.03 1682 43.14 2e-06 PHD and RING finger domain-containing protein 1 OS Mus musculus GN Phrf1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9P1Y6|PHRF1_HUMAN 355 406 + 52 Gaps:1 3.09 1649 43.14 3e-06 PHD and RING finger domain-containing protein 1 OS Homo sapiens GN PHRF1 PE 1 SV 3
blastp_uniprot_sprot sp|O88379|BAZ1A_MOUSE 361 407 + 47 Gaps:1 2.96 1555 45.65 3e-06 Bromodomain adjacent to zinc finger domain protein 1A OS Mus musculus GN Baz1a PE 1 SV 3
blastp_uniprot_sprot sp|Q9UGL1|KDM5B_HUMAN 357 428 + 72 Gaps:1 4.60 1544 39.44 4e-06 Lysine-specific demethylase 5B OS Homo sapiens GN KDM5B PE 1 SV 3
blastp_uniprot_sprot sp|Q8UVR5|BAZ1A_XENLA 361 426 + 66 Gaps:6 9.57 627 40.00 4e-06 Bromodomain adjacent to zinc finger domain protein 1A (Fragment) OS Xenopus laevis GN baz1a PE 2 SV 1
blastp_uniprot_sprot sp|Q9DE13|BAZ2B_CHICK 361 421 + 61 Gaps:1 2.82 2130 38.33 7e-06 Bromodomain adjacent to zinc finger domain protein 2B OS Gallus gallus GN BAZ2B PE 2 SV 1
blastp_uniprot_sprot sp|Q6IQX0|KD5BB_DANRE 357 428 + 72 Gaps:1 4.72 1503 38.03 7e-06 Lysine-specific demethylase 5B-B OS Danio rerio GN kdm5bb PE 2 SV 2
blastp_uniprot_sprot sp|Q9UIF8|BAZ2B_HUMAN 361 406 + 46 Gaps:1 2.08 2168 44.44 8e-06 Bromodomain adjacent to zinc finger domain protein 2B OS Homo sapiens GN BAZ2B PE 1 SV 3
blastp_uniprot_sprot sp|Q80Y84|KDM5B_MOUSE 357 428 + 72 Gaps:1 4.60 1544 38.03 8e-06 Lysine-specific demethylase 5B OS Mus musculus GN Kdm5b PE 1 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 360 407 48 SM00249 none PHD zinc finger IPR001965
PANTHER 67 94 28 PTHR22880 none none none
PANTHER 353 417 65 PTHR22880 none none none
ProSiteProfiles 358 409 52 PS50016 none Zinc finger PHD-type profile. IPR019787
PANTHER 67 94 28 PTHR22880:SF137 none none none
PANTHER 353 417 65 PTHR22880:SF137 none none none
Gene3D 347 417 71 G3DSA:3.30.40.10 none none IPR013083
SUPERFAMILY 348 411 64 SSF57903 none none IPR011011

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044

0 Targeting