Protein : Qrob_P0026660.2 Q. robur
Protein Identifier  ? Qrob_P0026660.2 Organism . Name  Quercus robur
Score  36.3 Score Type  egn
Protein Description  (M=2) KOG1030//KOG1032 - Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]. // Uncharacterized conserved protein contains GRAM domain [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 107  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v100194322m 26 81 + 56 none 28.72 195 80.36 8e-26 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10019435mg 26 81 + 56 none 9.56 586 82.14 4e-25 hypothetical protein
blastp_kegg lcl|cit:102623446 26 81 + 56 none 9.56 586 82.14 4e-25 C2 and GRAM domain-containing protein At1g03370-like
blastp_kegg lcl|fve:101299068 26 81 + 56 none 9.59 584 83.93 9e-25 C2 and GRAM domain-containing protein At1g03370-like
blastp_kegg lcl|rcu:RCOM_1238700 26 81 + 56 none 10.53 532 82.14 2e-24 hypothetical protein
blastp_kegg lcl|sot:102604959 26 79 + 54 none 19.22 281 83.33 2e-24 C2 and GRAM domain-containing protein At1g03370-like
blastp_kegg lcl|tcc:TCM_019867 26 79 + 54 none 9.20 587 85.19 2e-24 C2 domain-containing protein / GRAM domain-containing protein isoform 1
blastp_kegg lcl|pop:POPTR_0013s13070g 26 79 + 54 none 9.15 590 85.19 2e-24 C2 domain-containing family protein
blastp_kegg lcl|pxb:103960797 26 79 + 54 none 9.18 588 85.19 3e-24 C2 and GRAM domain-containing protein At1g03370
blastp_kegg lcl|pper:PRUPE_ppa003846mg 26 81 + 56 none 10.29 544 82.14 3e-24 hypothetical protein
blastp_uniprot_sprot sp|Q9ZVT9|C2GR1_ARATH 25 84 + 60 none 5.88 1020 38.33 3e-07 C2 and GRAM domain-containing protein At1g03370 OS Arabidopsis thaliana GN At1g03370 PE 2 SV 4
rpsblast_cdd gnl|CDD|175973 25 84 + 60 Gaps:1 59.80 102 32.79 2e-09 cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions.
rpsblast_cdd gnl|CDD|176014 26 92 + 67 Gaps:4 52.42 124 43.08 8e-09 cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins peptides carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites such as phytoalexins or defense-related proteins including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. Members have a type-II topology.
rpsblast_cdd gnl|CDD|201052 25 85 + 61 Gaps:3 75.29 85 34.38 5e-08 pfam00168 C2 C2 domain.
rpsblast_cdd gnl|CDD|175990 25 80 + 56 Gaps:2 45.31 128 27.59 3e-07 cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region a linker and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3 5-7 9 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3 4 5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. This cd contains the first C2 repeat C2A and has a type-I topology.
rpsblast_kog gnl|CDD|36248 25 82 + 58 Gaps:2 35.71 168 35.00 5e-10 KOG1030 KOG1030 KOG1030 Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only].
rpsblast_kog gnl|CDD|36250 11 98 + 88 Gaps:2 15.25 590 15.56 3e-09 KOG1032 KOG1032 KOG1032 Uncharacterized conserved protein contains GRAM domain [Function unknown].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 26 78 53 PTHR23319:SF10 none none none
Pfam 25 84 60 PF00168 none C2 domain IPR000008
SUPERFAMILY 25 84 60 SSF49562 none none IPR000008
Gene3D 25 76 52 G3DSA:2.60.40.150 none none IPR000008
PANTHER 26 78 53 PTHR23319 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044

0 Targeting