Protein : Qrob_P0025390.2 Q. robur
Protein Identifier  ? Qrob_P0025390.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=29) PTHR24420//PTHR24420:SF684 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 234  
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0 Synonyms

0 GO Terms

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_010G035800g 11 153 + 143 Gaps:2 23.81 609 55.86 8e-46 hypothetical protein
blastp_kegg lcl|pxb:103934368 4 156 + 153 Gaps:8 64.16 226 53.79 4e-45 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
blastp_kegg lcl|pxb:103934363 4 156 + 153 Gaps:8 64.16 226 53.79 4e-45 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
blastp_kegg lcl|vvi:100251471 1 156 + 156 Gaps:1 25.28 621 50.32 7e-45 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like
blastp_kegg lcl|gmx:100305365 25 156 + 132 none 23.08 572 58.33 2e-44 protein kinase
blastp_kegg lcl|cic:CICLE_v10014610mg 25 153 + 129 none 20.71 623 56.59 9e-44 hypothetical protein
blastp_kegg lcl|cit:102612624 25 153 + 129 none 20.71 623 56.59 9e-44 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like
blastp_kegg lcl|tcc:TCM_002598 15 156 + 142 Gaps:8 21.65 619 56.72 2e-43 Probably inactive leucine-rich repeat receptor-like protein kinase
blastp_kegg lcl|rcu:RCOM_0605720 6 156 + 151 Gaps:1 25.42 598 53.29 2e-43 serine-threonine protein kinase plant-type putative
blastp_kegg lcl|mdm:103445514 5 156 + 152 Gaps:8 73.10 197 52.78 3e-43 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
blastp_uniprot_sprot sp|Q9ASS4|Y5838_ARATH 27 156 + 130 Gaps:1 20.81 620 47.29 9e-30 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS Arabidopsis thaliana GN At5g48380 PE 1 SV 1
blastp_uniprot_sprot sp|C0LGI5|Y1699_ARATH 19 221 + 203 Gaps:12 32.99 591 32.82 2e-24 Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS Arabidopsis thaliana GN At1g69990 PE 2 SV 1
blastp_uniprot_sprot sp|O04567|Y1719_ARATH 29 156 + 128 Gaps:1 21.13 601 38.58 8e-24 Probable inactive receptor kinase At1g27190 OS Arabidopsis thaliana GN At1g27190 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SGP2|HSL1_ARATH 32 169 + 138 Gaps:32 15.86 996 32.91 1e-09 Receptor-like protein kinase HSL1 OS Arabidopsis thaliana GN HSL1 PE 2 SV 1
blastp_uniprot_sprot sp|C0LGF5|Y1341_ARATH 83 156 + 74 Gaps:7 17.72 1072 40.53 2e-08 Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS Arabidopsis thaliana GN At1g34110 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M8T0|Y3288_ARATH 30 144 + 115 Gaps:12 16.75 627 40.95 2e-08 Probable inactive receptor kinase At3g02880 OS Arabidopsis thaliana GN At3g02880 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SYQ8|CLV1_ARATH 31 153 + 123 Gaps:9 12.65 980 33.06 1e-07 Receptor protein kinase CLAVATA1 OS Arabidopsis thaliana GN CLV1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LT96|Y5977_ARATH 31 184 + 154 Gaps:15 15.75 946 34.90 2e-07 Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS Arabidopsis thaliana GN At5g49770 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LRT1|Y3804_ARATH 82 156 + 75 Gaps:1 7.28 1016 41.89 2e-07 Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS Arabidopsis thaliana GN At3g28040 PE 2 SV 1
blastp_uniprot_sprot sp|C0LGR3|Y4265_ARATH 79 156 + 78 none 7.15 1091 35.90 3e-07 Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS Arabidopsis thaliana GN At4g26540 PE 1 SV 1
rpsblast_cdd gnl|CDD|177728 19 150 + 132 Gaps:8 20.14 968 33.33 2e-08 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 149 149 PTHR24420 none none none
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 31 156 126 G3DSA:3.80.10.10 none none none
PANTHER 1 149 149 PTHR24420:SF684 none none none
Pfam 30 73 44 PF08263 none Leucine rich repeat N-terminal domain IPR013210
Phobius 29 151 123 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 152 176 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 7 20 14 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 177 233 57 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 29 156 128 SSF52058 none none none
Phobius 21 28 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
TMHMM 154 176 22
SignalP_EUK 1 28 27

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 1 0.955 0.031 NON-PLANT 28