Protein : Qrob_P0025310.2 Q. robur
Protein Identifier  ? Qrob_P0025310.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=88) 2.7.10.1 - Receptor protein-tyrosine kinase. Code Enzyme  EC:2.7.10.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 299  
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0 Synonyms

0 GO Terms

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0605720 26 279 + 254 Gaps:33 46.66 598 40.86 2e-49 serine-threonine protein kinase plant-type putative
blastp_kegg lcl|cic:CICLE_v10014610mg 18 249 + 232 Gaps:29 40.61 623 43.48 3e-47 hypothetical protein
blastp_kegg lcl|cit:102612624 18 249 + 232 Gaps:29 40.61 623 43.48 3e-47 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like
blastp_kegg lcl|rcu:RCOM_1628390 36 202 + 167 Gaps:26 63.25 302 48.69 1e-44 ATP binding protein putative
blastp_kegg lcl|pop:POPTR_0017s036502 27 224 + 198 Gaps:27 64.43 343 44.80 7e-44 hypothetical protein
blastp_kegg lcl|pop:POPTR_0017s03710g 16 293 + 278 Gaps:34 48.30 617 39.93 2e-43 hypothetical protein
blastp_kegg lcl|pxb:103934368 13 203 + 191 Gaps:25 95.58 226 43.52 2e-42 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
blastp_kegg lcl|pxb:103934363 13 203 + 191 Gaps:25 95.58 226 43.52 2e-42 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380
blastp_kegg lcl|fve:101311021 22 271 + 250 Gaps:44 44.05 613 40.74 2e-42 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like
blastp_kegg lcl|mtr:MTR_7g080810 25 249 + 225 Gaps:29 40.00 615 40.65 2e-42 Probably inactive leucine-rich repeat receptor-like protein kinase
blastp_pdb 3rgz_A 52 203 + 152 Gaps:18 38.54 768 40.54 5e-17 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 52 203 + 152 Gaps:18 38.54 768 40.54 5e-17 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rj0_A 52 203 + 152 Gaps:18 38.34 772 40.54 5e-17 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 52 203 + 152 Gaps:18 38.34 772 40.54 5e-17 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_uniprot_sprot sp|Q9ASS4|Y5838_ARATH 39 249 + 211 Gaps:32 37.58 620 33.48 5e-28 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS Arabidopsis thaliana GN At5g48380 PE 1 SV 1
blastp_uniprot_sprot sp|C0LGI5|Y1699_ARATH 34 248 + 215 Gaps:43 39.26 591 34.91 1e-20 Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS Arabidopsis thaliana GN At1g69990 PE 2 SV 1
blastp_uniprot_sprot sp|O22938|Y2182_ARATH 32 199 + 168 Gaps:29 40.56 890 47.92 3e-17 Leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 OS Arabidopsis thaliana GN At2g41820 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZPS9|BRL2_ARATH 55 204 + 150 Gaps:31 38.23 1143 42.79 7e-17 Serine/threonine-protein kinase BRI1-like 2 OS Arabidopsis thaliana GN BRL2 PE 1 SV 1
blastp_uniprot_sprot sp|O22476|BRI1_ARATH 70 202 + 133 Gaps:12 20.23 1196 40.91 2e-16 Protein BRASSINOSTEROID INSENSITIVE 1 OS Arabidopsis thaliana GN BRI1 PE 1 SV 1
blastp_uniprot_sprot sp|O82318|Y2579_ARATH 27 195 + 169 Gaps:25 43.54 960 36.60 4e-16 Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS Arabidopsis thaliana GN At2g25790 PE 1 SV 1
blastp_uniprot_sprot sp|O04567|Y1719_ARATH 40 202 + 163 Gaps:28 30.78 601 34.59 8e-16 Probable inactive receptor kinase At1g27190 OS Arabidopsis thaliana GN At1g27190 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZWC8|BRL1_ARATH 53 213 + 161 Gaps:56 44.77 1166 35.63 2e-15 Serine/threonine-protein kinase BRI1-like 1 OS Arabidopsis thaliana GN BRL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LJF3|BRL3_ARATH 41 253 + 213 Gaps:39 35.57 1164 35.51 3e-15 Receptor-like protein kinase BRI1-like 3 OS Arabidopsis thaliana GN BRL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VYT3|Y4052_ARATH 40 204 + 165 Gaps:36 26.70 648 34.68 1e-14 Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS Arabidopsis thaliana GN At4g30520 PE 2 SV 1
rpsblast_cdd gnl|CDD|178695 38 240 + 203 Gaps:29 32.10 623 34.50 3e-21 PLN03150 PLN03150 hypothetical protein Provisional.
rpsblast_cdd gnl|CDD|177728 30 197 + 168 Gaps:81 61.16 968 43.24 4e-16 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 39 79 41 PF08263 none Leucine rich repeat N-terminal domain IPR013210
Phobius 240 298 59 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 216 239 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 14 14 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 28 32 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 32 32 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 42 179 138 G3DSA:3.80.10.10 none none none
SUPERFAMILY 37 264 228 SSF52058 none none none
Phobius 15 27 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 9 200 192 PTHR24420 none none none
Phobius 33 215 183 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
SignalP_EUK 1 32 31
TMHMM 220 242 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 32   Secretory pathway 2 0.846 0.102 NON-PLANT 32