Protein : Qrob_P0025200.2 Q. robur
Protein Identifier  ? Qrob_P0025200.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR22880:SF137 - GH11602P (PTHR22880:SF137) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 127  
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100853132 1 125 + 125 Gaps:8 47.37 247 51.28 6e-28 bromodomain adjacent to zinc finger domain protein 2B-like
blastp_kegg lcl|pda:103706375 1 85 + 85 none 5.41 1571 58.82 7e-27 uncharacterized LOC103706375
blastp_kegg lcl|atr:s00149p00102010 1 125 + 125 Gaps:2 7.81 1575 45.53 2e-26 AMTR_s00149p00102010 hypothetical protein
blastp_kegg lcl|vvi:100243800 1 126 + 126 Gaps:6 7.98 1528 48.36 3e-26 uncharacterized LOC100243800
blastp_kegg lcl|cic:CICLE_v10033462mg 1 83 + 83 Gaps:3 8.19 977 66.25 1e-25 hypothetical protein
blastp_kegg lcl|pda:103714039 1 113 + 113 Gaps:3 7.03 1651 45.69 1e-25 uncharacterized LOC103714039
blastp_kegg lcl|cit:102623421 1 83 + 83 Gaps:3 4.83 1658 66.25 2e-25 uncharacterized LOC102623421
blastp_kegg lcl|tcc:TCM_025557 1 79 + 79 none 5.36 1474 62.03 4e-25 RING/FYVE/PHD zinc finger superfamily protein putative isoform 1
blastp_kegg lcl|tcc:TCM_015723 1 126 + 126 Gaps:21 8.74 1201 56.19 3e-24 Uncharacterized protein isoform 1
blastp_kegg lcl|eus:EUTSA_v10020044mg 1 56 + 56 none 6.47 865 80.36 4e-24 hypothetical protein
blastp_pdb 2e6r_A 3 73 + 71 Gaps:1 76.09 92 28.57 5e-06 mol:protein length:92 Jumonji/ARID domain-containing protein 1D
blastp_uniprot_sprot sp|Q5F3R2|KDM5B_CHICK 1 68 + 68 Gaps:1 4.40 1522 34.33 2e-06 Lysine-specific demethylase 5B OS Gallus gallus GN KDM5B PE 2 SV 1
blastp_uniprot_sprot sp|Q9UGL1|KDM5B_HUMAN 1 68 + 68 Gaps:1 4.34 1544 34.33 2e-06 Lysine-specific demethylase 5B OS Homo sapiens GN KDM5B PE 1 SV 3
blastp_uniprot_sprot sp|Q80Y84|KDM5B_MOUSE 1 68 + 68 Gaps:1 4.34 1544 34.33 2e-06 Lysine-specific demethylase 5B OS Mus musculus GN Kdm5b PE 1 SV 1
blastp_uniprot_sprot sp|Q3UXZ9|KDM5A_MOUSE 1 53 + 53 Gaps:1 3.08 1690 40.38 3e-06 Lysine-specific demethylase 5A OS Mus musculus GN Kdm5a PE 1 SV 2
blastp_uniprot_sprot sp|P29375|KDM5A_HUMAN 1 53 + 53 Gaps:1 3.08 1690 40.38 3e-06 Lysine-specific demethylase 5A OS Homo sapiens GN KDM5A PE 1 SV 3
blastp_uniprot_sprot sp|Q6IQX0|KD5BB_DANRE 1 53 + 53 Gaps:1 3.46 1503 38.46 3e-06 Lysine-specific demethylase 5B-B OS Danio rerio GN kdm5bb PE 2 SV 2
blastp_uniprot_sprot sp|Q63625|PHRF1_RAT 4 121 + 118 Gaps:7 6.59 1685 28.83 4e-06 PHD and RING finger domain-containing protein 1 OS Rattus norvegicus GN Phrf1 PE 1 SV 2
blastp_uniprot_sprot sp|A6H619|PHRF1_MOUSE 4 121 + 118 Gaps:7 6.60 1682 28.83 4e-06 PHD and RING finger domain-containing protein 1 OS Mus musculus GN Phrf1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SGH2|MBD9_ARATH 3 55 + 53 Gaps:1 2.39 2176 34.62 1e-05 Methyl-CpG-binding domain-containing protein 9 OS Arabidopsis thaliana GN MBD9 PE 2 SV 1
rpsblast_kog gnl|CDD|36043 4 60 + 57 none 5.03 1134 36.84 8e-07 KOG0825 KOG0825 KOG0825 PHD Zn-finger protein [General function prediction only].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 3 50 48 PF00628 none PHD-finger IPR019787
SUPERFAMILY 2 55 54 SSF57903 none none IPR011011
PANTHER 1 72 72 PTHR22880 none none none
PANTHER 1 72 72 PTHR22880:SF137 none none none
Gene3D 2 61 60 G3DSA:3.30.40.10 none none IPR013083

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting