Protein : Qrob_P0025020.2 Q. robur
Protein Identifier  ? Qrob_P0025020.2 Organism . Name  Quercus robur
Score  91.6 Score Type  egn
Protein Description  (M=1) PTHR24202:SF4 - E3 UBIQUITIN-PROTEIN LIGASE MIB2 (PTHR24202:SF4) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 241  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa025642mg 33 238 + 206 Gaps:2 60.95 338 48.54 1e-59 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa019130mg 18 239 + 222 Gaps:2 70.51 312 46.82 4e-58 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa019405mg 16 239 + 224 Gaps:8 99.13 230 44.30 8e-58 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017822mg 18 240 + 223 Gaps:3 35.81 620 47.30 9e-58 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppb023573mg 18 239 + 222 Gaps:2 71.43 308 45.00 1e-54 hypothetical protein
blastp_kegg lcl|pmum:103343633 33 238 + 206 Gaps:2 65.18 313 44.61 8e-54 uncharacterized LOC103343633
blastp_kegg lcl|pmum:103343292 18 239 + 222 Gaps:9 71.00 300 46.95 1e-53 uncharacterized LOC103343292
blastp_kegg lcl|pmum:103343293 33 240 + 208 Gaps:2 29.22 705 46.12 8e-53 uncharacterized LOC103343293
blastp_kegg lcl|fve:101304047 42 239 + 198 none 26.90 736 46.46 1e-52 uncharacterized protein LOC101304047
blastp_kegg lcl|pmum:103331136 18 239 + 222 Gaps:4 63.61 349 43.24 3e-52 uncharacterized LOC103331136
blastp_uniprot_sprot sp|Q9Y575|ASB3_HUMAN 75 159 + 85 Gaps:6 16.41 518 38.82 1e-06 Ankyrin repeat and SOCS box protein 3 OS Homo sapiens GN ASB3 PE 1 SV 1
blastp_uniprot_sprot sp|Q92625|ANS1A_HUMAN 24 187 + 164 Gaps:12 13.93 1134 30.38 2e-06 Ankyrin repeat and SAM domain-containing protein 1A OS Homo sapiens GN ANKS1A PE 1 SV 4
blastp_uniprot_sprot sp|Q5F478|ANR44_CHICK 23 159 + 137 Gaps:3 13.54 990 29.85 3e-06 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS Gallus gallus GN ANKRD44 PE 2 SV 1
blastp_uniprot_sprot sp|Q54KA7|SECG_DICDI 73 215 + 143 Gaps:10 13.89 986 31.39 4e-06 Ankyrin repeat PH and SEC7 domain containing protein secG OS Dictyostelium discoideum GN secG PE 2 SV 1
blastp_uniprot_sprot sp|Q07DW4|CTTB2_MUNRE 38 159 + 122 Gaps:4 7.19 1642 31.36 5e-06 Cortactin-binding protein 2 OS Muntiacus reevesi GN CTTNBP2 PE 3 SV 1
blastp_uniprot_sprot sp|Q02357|ANK1_MOUSE 59 159 + 101 Gaps:7 5.26 1862 34.69 5e-06 Ankyrin-1 OS Mus musculus GN Ank1 PE 1 SV 2
blastp_uniprot_sprot sp|Q07E28|CTTB2_NEONE 38 159 + 122 Gaps:4 7.12 1658 32.20 9e-06 Cortactin-binding protein 2 OS Neofelis nebulosa GN CTTNBP2 PE 3 SV 1
blastp_uniprot_sprot sp|A0M8T5|CTTB2_FELCA 38 159 + 122 Gaps:4 7.12 1658 32.20 9e-06 Cortactin-binding protein 2 OS Felis catus GN CTTNBP2 PE 3 SV 1
blastp_uniprot_sprot sp|P59672|ANS1A_MOUSE 63 187 + 125 Gaps:11 10.26 1150 34.75 9e-06 Ankyrin repeat and SAM domain-containing protein 1A OS Mus musculus GN Anks1a PE 1 SV 3
rpsblast_cdd gnl|CDD|29261 33 159 + 127 Gaps:8 97.62 126 42.28 2e-10 cd00204 ANK ankyrin repeats ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin repeats are stacked in a superhelical arrangement this alignment contains 4 consecutive repeats..
rpsblast_cdd gnl|CDD|205076 40 159 + 120 Gaps:15 98.90 91 44.44 2e-07 pfam12796 Ank_2 Ankyrin repeats (3 copies).
rpsblast_kog gnl|CDD|39379 25 163 + 139 Gaps:8 11.81 1143 27.41 8e-08 KOG4177 KOG4177 KOG4177 Ankyrin [Cell wall/membrane/envelope biogenesis].
rpsblast_kog gnl|CDD|39613 29 159 + 131 Gaps:5 56.64 226 29.69 3e-07 KOG4412 KOG4412 KOG4412 26S proteasome regulatory complex subunit PSMD10 [Posttranslational modification protein turnover chaperones].

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 37 80 44 G3DSA:1.25.40.20 none none IPR020683
SMART 139 169 31 SM00248 none ankyrin repeats IPR002110
SMART 105 134 30 SM00248 none ankyrin repeats IPR002110
SMART 70 101 32 SM00248 none ankyrin repeats IPR002110
PANTHER 39 159 121 PTHR24202:SF4 none none none
PANTHER 39 159 121 PTHR24202 none none none
SUPERFAMILY 40 221 182 SSF48403 none none IPR020683
Pfam 42 132 91 PF12796 none Ankyrin repeats (3 copies) IPR020683
ProSiteProfiles 70 102 33 PS50088 none Ankyrin repeat profile. IPR002110
Gene3D 81 160 80 G3DSA:1.25.40.20 none none IPR020683
ProSiteProfiles 70 159 90 PS50297 none Ankyrin repeat region circular profile. IPR020683

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting