Protein : Qrob_P0023270.2 Q. robur
Protein Identifier  ? Qrob_P0023270.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=19) PF05678 - VQ motif Gene Prediction Quality  validated
Protein length 

Sequence

Length: 124  
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0 Synonyms

0 GO Terms

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103330797 1 117 + 117 Gaps:4 95.28 127 56.20 2e-33 uncharacterized LOC103330797
blastp_kegg lcl|fve:101292354 1 120 + 120 Gaps:11 97.73 132 51.94 4e-28 sigma factor binding protein 2 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa013276mg 1 117 + 117 Gaps:8 95.42 131 52.00 2e-27 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s19420g 1 117 + 117 Gaps:30 99.28 138 48.18 2e-24 POPTRDRAFT_555068 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1451990 1 96 + 96 Gaps:4 67.13 143 58.33 2e-23 protein with unknown function
blastp_kegg lcl|mdm:103438726 1 119 + 119 Gaps:10 96.90 129 52.00 4e-23 uncharacterized LOC103438726
blastp_kegg lcl|mdm:103411950 1 119 + 119 Gaps:15 96.77 124 55.00 7e-23 uncharacterized LOC103411950
blastp_kegg lcl|pxb:103952175 1 119 + 119 Gaps:8 96.90 129 51.20 1e-22 uncharacterized LOC103952175
blastp_kegg lcl|pxb:103961901 1 108 + 108 Gaps:22 96.61 118 50.00 7e-20 uncharacterized LOC103961901
blastp_kegg lcl|cmo:103489524 1 76 + 76 Gaps:8 57.14 140 60.00 9e-18 sigma factor binding protein 1 chloroplastic-like
blastp_uniprot_sprot sp|Q9LDH1|SIB1_ARATH 9 52 + 44 none 29.14 151 61.36 7e-11 Sigma factor binding protein 1 chloroplastic OS Arabidopsis thaliana GN SIB1 PE 1 SV 1
blastp_uniprot_sprot sp|O80669|SIB2_ARATH 10 52 + 43 none 30.50 141 60.47 1e-10 Sigma factor binding protein 2 chloroplastic OS Arabidopsis thaliana GN SIB2 PE 2 SV 1

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 26 55 30 PF05678 none VQ motif IPR008889

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4

0 Targeting