Protein : Qrob_P0023000.2 Q. robur
Protein Identifier  ? Qrob_P0023000.2 Organism . Name  Quercus robur
Score  46.4 Score Type  egn
Protein Description  (M=7) PF00646//PF03478 - F-box domain // Protein of unknown function (DUF295) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 435  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103403669 33 434 + 402 Gaps:25 96.27 429 46.25 3e-107 putative F-box protein At5g55150
blastp_kegg lcl|pxb:103948713 31 434 + 404 Gaps:25 96.74 429 46.02 5e-106 putative F-box protein At5g55150
blastp_kegg lcl|pper:PRUPE_ppa021461mg 33 434 + 402 Gaps:56 96.17 418 44.78 4e-94 hypothetical protein
blastp_kegg lcl|pmum:103323859 33 434 + 402 Gaps:57 96.18 419 44.67 4e-94 putative F-box protein At4g17565
blastp_kegg lcl|pop:POPTR_0004s14250g 22 434 + 413 Gaps:45 96.97 462 37.72 5e-87 POPTRDRAFT_759449 F-box family protein
blastp_kegg lcl|pper:PRUPE_ppa026622mg 41 434 + 394 Gaps:36 100.00 390 43.59 2e-85 hypothetical protein
blastp_kegg lcl|pmum:103342937 77 434 + 358 Gaps:33 98.13 374 43.60 8e-83 putative F-box protein At2g04810
blastp_kegg lcl|cic:CICLE_v10006735mg 29 434 + 406 Gaps:70 97.39 421 40.49 9e-81 hypothetical protein
blastp_kegg lcl|cit:102622280 29 434 + 406 Gaps:70 97.39 421 40.00 4e-79 putative F-box protein At4g17565-like
blastp_kegg lcl|tcc:TCM_021021 39 433 + 395 Gaps:43 93.61 438 38.05 5e-77 F-box family protein with a domain of Uncharacterized protein function putative
blastp_uniprot_sprot sp|O65454|FB334_ARATH 31 413 + 383 Gaps:60 92.48 399 27.91 8e-25 Probable F-box protein At4g22060 OS Arabidopsis thaliana GN At4g22060 PE 4 SV 2
blastp_uniprot_sprot sp|O49624|FB242_ARATH 35 418 + 384 Gaps:69 90.30 402 28.65 1e-21 Putative F-box protein At4g22180 OS Arabidopsis thaliana GN At4g22180 PE 4 SV 3
blastp_uniprot_sprot sp|O49647|FB246_ARATH 35 420 + 386 Gaps:80 93.43 396 27.30 2e-21 Putative F-box protein At4g22660 OS Arabidopsis thaliana GN At4g22660 PE 4 SV 1
blastp_uniprot_sprot sp|P0CG94|FB347_ARATH 35 418 + 384 Gaps:62 92.56 363 28.27 3e-19 Probable F-box protein At4g22165 OS Arabidopsis thaliana GN At4g22165 PE 4 SV 1
blastp_uniprot_sprot sp|Q9SUG4|FB241_ARATH 35 431 + 397 Gaps:67 96.42 363 28.57 3e-15 Putative F-box protein At4g22170 OS Arabidopsis thaliana GN At4g22170 PE 4 SV 2
blastp_uniprot_sprot sp|O80603|FB1_ARATH 35 419 + 385 Gaps:71 93.73 399 26.74 1e-14 F-box protein At1g10110 OS Arabidopsis thaliana GN At1g10110 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUF1|FB99_ARATH 35 414 + 380 Gaps:52 91.25 377 24.71 1e-13 F-box protein At2g05970 OS Arabidopsis thaliana GN At2g05970 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKZ7|FB301_ARATH 34 417 + 384 Gaps:82 89.34 394 27.27 1e-12 Putative F-box protein At5g66830 OS Arabidopsis thaliana GN At5g66830 PE 4 SV 1
blastp_uniprot_sprot sp|Q9LQB0|FB80_ARATH 29 412 + 384 Gaps:69 88.53 401 26.76 2e-12 F-box protein At1g69090 OS Arabidopsis thaliana GN At1g69090 PE 4 SV 2
blastp_uniprot_sprot sp|Q9SU05|FBK82_ARATH 37 397 + 361 Gaps:74 80.37 382 28.01 2e-12 Putative F-box/kelch-repeat protein At4g12810 OS Arabidopsis thaliana GN At4g12810 PE 4 SV 1
rpsblast_cdd gnl|CDD|178754 36 387 + 352 Gaps:50 90.08 373 23.21 3e-10 PLN03215 PLN03215 ascorbic acid mannose pathway regulator 1 Provisional.
rpsblast_cdd gnl|CDD|202658 346 396 + 51 none 96.23 53 41.18 9e-07 pfam03478 DUF295 Protein of unknown function (DUF295). This family of proteins are found in plants. The function of the proteins is unknown.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 99 433 335 PTHR11102 none none none
Pfam 347 406 60 PF03478 none Protein of unknown function (DUF295) IPR005174
ProSiteProfiles 33 88 56 PS50181 none F-box domain profile. IPR001810
Pfam 35 70 36 PF00646 none F-box domain IPR001810
SMART 39 79 41 SM00256 none A Receptor for Ubiquitination Targets IPR001810
PANTHER 99 433 335 PTHR11102:SF11 none none none
SUPERFAMILY 29 85 57 SSF81383 none none IPR001810
Gene3D 31 72 42 G3DSA:1.20.1280.50 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 68   Mitochondrion 5 0.079 0.576 NON-PLANT 68