4 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005506 | iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. |
GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. |
GO:0020037 | heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
GO:0055114 | oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
45 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pvu:PHAVU_004G005800g | 1 | 505 | + | 505 | Gaps:9 | 100.00 | 508 | 55.71 | 0.0 | hypothetical protein |
blastp_kegg | lcl|rcu:RCOM_1064650 | 9 | 504 | + | 496 | Gaps:8 | 98.62 | 509 | 55.58 | 0.0 | cytochrome P450 putative (EC:1.14.14.1) |
blastp_kegg | lcl|rcu:RCOM_1064670 | 14 | 503 | + | 490 | Gaps:6 | 97.43 | 505 | 56.10 | 0.0 | cytochrome P450 putative (EC:1.14.14.1) |
blastp_kegg | lcl|gmx:100779590 | 4 | 505 | + | 502 | Gaps:12 | 99.60 | 502 | 55.20 | 0.0 | cytochrome P450 86B1-like |
blastp_kegg | lcl|cic:CICLE_v10017795mg | 11 | 505 | + | 495 | Gaps:25 | 99.80 | 509 | 54.13 | 0.0 | hypothetical protein |
blastp_kegg | lcl|cit:102610449 | 10 | 503 | + | 494 | Gaps:17 | 99.41 | 510 | 54.64 | 0.0 | cytochrome P450 86B1-like |
blastp_kegg | lcl|pvu:PHAVU_010G019500g | 23 | 505 | + | 483 | Gaps:11 | 96.03 | 504 | 55.79 | 0.0 | hypothetical protein |
blastp_kegg | lcl|pop:POPTR_0001s40840g | 11 | 503 | + | 493 | Gaps:17 | 98.27 | 519 | 53.73 | 0.0 | hypothetical protein |
blastp_kegg | lcl|pop:POPTR_0005s06540g | 4 | 505 | + | 502 | Gaps:15 | 99.61 | 517 | 52.43 | 0.0 | POPTRDRAFT_558429 hypothetical protein |
blastp_kegg | lcl|cit:102609826 | 1 | 505 | + | 505 | Gaps:26 | 99.81 | 518 | 54.16 | 0.0 | cytochrome P450 86B1-like |
blastp_pdb | 3eqm_A | 67 | 482 | + | 416 | Gaps:46 | 76.74 | 503 | 26.42 | 6e-20 | mol:protein length:503 Cytochrome P450 19A1 |
blastp_pdb | 3mdv_B | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdv_A | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdt_B | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdt_A | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdr_B | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdr_A | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 3mdm_A | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cholesterol 24-hydroxylase |
blastp_pdb | 2q9g_A | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cytochrome P450 46A1 |
blastp_pdb | 2q9f_A | 111 | 480 | + | 370 | Gaps:32 | 75.88 | 456 | 25.43 | 8e-18 | mol:protein length:456 Cytochrome P450 46A1 |
blastp_uniprot_sprot | sp|Q9FMY1|C86B1_ARATH | 9 | 505 | + | 497 | Gaps:14 | 89.98 | 559 | 39.56 | 3e-127 | Cytochrome P450 86B1 OS Arabidopsis thaliana GN CYP86B1 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9CAD6|C86A7_ARATH | 35 | 503 | + | 469 | Gaps:20 | 90.82 | 523 | 39.79 | 7e-114 | Cytochrome P450 86A7 OS Arabidopsis thaliana GN CYP86A7 PE 2 SV 1 |
blastp_uniprot_sprot | sp|O80823|C86A8_ARATH | 35 | 503 | + | 469 | Gaps:23 | 89.01 | 537 | 39.12 | 3e-106 | Cytochrome P450 86A8 OS Arabidopsis thaliana GN CYP86A8 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9LMM1|C86A4_ARATH | 9 | 503 | + | 495 | Gaps:29 | 92.42 | 554 | 36.52 | 7e-106 | Cytochrome P450 86A4 OS Arabidopsis thaliana GN CYP86A4 PE 2 SV 1 |
blastp_uniprot_sprot | sp|O23066|C86A2_ARATH | 4 | 503 | + | 500 | Gaps:26 | 91.50 | 553 | 35.97 | 3e-104 | Cytochrome P450 86A2 OS Arabidopsis thaliana GN CYP86A2 PE 1 SV 1 |
blastp_uniprot_sprot | sp|P48422|C86A1_ARATH | 36 | 503 | + | 468 | Gaps:24 | 92.01 | 513 | 36.65 | 3e-97 | Cytochrome P450 86A1 OS Arabidopsis thaliana GN CYP86A1 PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q50EK3|C04C1_PINTA | 29 | 503 | + | 475 | Gaps:42 | 94.79 | 518 | 33.60 | 6e-83 | Cytochrome P450 704C1 OS Pinus taeda GN CYP704C1 PE 2 SV 1 |
blastp_uniprot_sprot | sp|P98188|C94A2_VICSA | 75 | 503 | + | 429 | Gaps:28 | 82.85 | 513 | 36.00 | 1e-79 | Cytochrome P450 94A2 OS Vicia sativa GN CYP94A2 PE 2 SV 1 |
blastp_uniprot_sprot | sp|O81117|C94A1_VICSA | 75 | 503 | + | 429 | Gaps:26 | 82.30 | 514 | 33.33 | 5e-73 | Cytochrome P450 94A1 OS Vicia sativa GN CYP94A1 PE 2 SV 2 |
blastp_uniprot_sprot | sp|Q12581|CP52X_CANMA | 59 | 484 | + | 426 | Gaps:53 | 80.04 | 526 | 29.69 | 4e-41 | Cytochrome P450 52A5 OS Candida maltosa GN CYP52A5 PE 1 SV 1 |
19 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
PANTHER | 1 | 503 | 503 | PTHR24296:SF1 | none | none | none |
PANTHER | 1 | 503 | 503 | PTHR24296 | none | none | none |
Pfam | 33 | 480 | 448 | PF00067 | "Reactome:REACT_13433" | Cytochrome P450 | IPR001128 |
Gene3D | 34 | 503 | 470 | G3DSA:1.10.630.10 | "Reactome:REACT_13433" | none | IPR001128 |
Phobius | 23 | 28 | 6 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
PRINTS | 295 | 312 | 18 | PR00463 | none | E-class P450 group I signature | IPR002401 |
PRINTS | 441 | 451 | 11 | PR00463 | none | E-class P450 group I signature | IPR002401 |
PRINTS | 451 | 474 | 24 | PR00463 | none | E-class P450 group I signature | IPR002401 |
PRINTS | 315 | 341 | 27 | PR00463 | none | E-class P450 group I signature | IPR002401 |
SUPERFAMILY | 34 | 503 | 470 | SSF48264 | "Reactome:REACT_13433" | none | IPR001128 |
PRINTS | 363 | 374 | 12 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
PRINTS | 442 | 451 | 10 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
PRINTS | 306 | 323 | 18 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
PRINTS | 451 | 462 | 12 | PR00385 | "Reactome:REACT_13433" | P450 superfamily signature | IPR001128 |
Phobius | 6 | 22 | 17 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
ProSitePatterns | 444 | 453 | 10 | PS00086 | "Reactome:REACT_13433" | Cytochrome P450 cysteine heme-iron ligand signature. | IPR017972 |
Phobius | 29 | 48 | 20 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Phobius | 49 | 505 | 457 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Phobius | 1 | 5 | 5 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
5 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2014_vSeqBC_3P | Qrob_Chr10 | 10 | s_1A6CK6_610 | v_7092_29 | 4,28 | 0 | 23,27 | lod | 2,8619 | 7 |
Bourran2_2015_nEpis_3P | Qrob_Chr12 | 12 | s_1AOES6_1466 | s_1B0DDG_1094 | 28,97 | 28,55 | 30,1 | lod | 3.6 | 8.4 |
Bourran2_2014_nFork*_3P | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,28 | 7,43 | 41,48 | lod | 2,4044 | 5,5 |
Bourran1_2004_QTL4_peak_Bud_burst_3P | Qrob_Chr04 | 4 | s_1AHUWN_1101 | s_1BRNG7_1618 | 30,55 | 0 | 47,55 | lod | 2,8 | 7,4 |
Bourran2_2002_QTL10_peak_Bud_burst_A4 | Qrob_Chr04 | 4 | s_1B59MJ_737 | s_1BGLSD_999 | 15,86 | 0 | 41,66 | lod | 2,8 | 4 |