Protein : Qrob_P0022080.2 Q. robur
Protein Identifier  ? Qrob_P0022080.2 Organism . Name  Quercus robur
Protein Description  (M=13) PF00560//PF00931//PF12799 - Leucine Rich Repeat // NB-ARC domain // Leucine Rich repeats (2 copies) Alias (in v1)  Qrob_P0182440.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 1238  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_045419 49 1224 + 1176 Gaps:129 98.67 1276 44.56 0.0 LRR and NB-ARC domains-containing disease resistance protein putative
blastp_kegg lcl|vvi:100244934 1 1236 + 1236 Gaps:138 99.54 1308 44.09 0.0 putative disease resistance RPP13-like protein 1
blastp_kegg lcl|vvi:100265114 33 1236 + 1204 Gaps:135 97.20 1357 41.62 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|vvi:100260309 20 1214 + 1195 Gaps:155 96.58 1257 44.48 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|vvi:100250349 33 1224 + 1192 Gaps:131 95.39 1345 41.54 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|vvi:100267085 33 1224 + 1192 Gaps:155 95.11 1330 42.45 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|vvi:100258523 20 1224 + 1205 Gaps:130 96.22 1350 39.95 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|vvi:100243138 20 1224 + 1205 Gaps:144 96.28 1318 41.45 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|tcc:TCM_040705 1 1236 + 1236 Gaps:179 97.81 1279 43.09 0.0 LRR and NB-ARC domains-containing disease resistance protein putative
blastp_kegg lcl|vvi:100246534 20 1224 + 1205 Gaps:133 96.26 1336 40.36 0.0 putative disease resistance protein At3g14460-like
blastp_uniprot_sprot sp|Q9LRR4|R13L1_ARATH 6 1075 + 1070 Gaps:133 95.64 1054 39.19 2e-170 Putative disease resistance RPP13-like protein 1 OS Arabidopsis thaliana GN RPPL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LRR5|DRL21_ARATH 31 1237 + 1207 Gaps:110 85.11 1424 41.42 4e-160 Putative disease resistance protein At3g14460 OS Arabidopsis thaliana GN At3g14460 PE 3 SV 1
blastp_uniprot_sprot sp|Q7XA39|RGA4_SOLBU 34 970 + 937 Gaps:177 94.53 988 33.19 3e-111 Putative disease resistance protein RGA4 OS Solanum bulbocastanum GN RGA4 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XA40|RGA3_SOLBU 43 969 + 927 Gaps:164 93.45 992 32.90 6e-109 Putative disease resistance protein RGA3 OS Solanum bulbocastanum GN RGA3 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XBQ9|RGA2_SOLBU 43 1137 + 1095 Gaps:209 93.30 970 37.57 2e-107 Disease resistance protein RGA2 OS Solanum bulbocastanum GN RGA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XA42|RGA1_SOLBU 43 952 + 910 Gaps:158 91.52 979 32.81 4e-106 Putative disease resistance protein RGA1 OS Solanum bulbocastanum GN RGA1 PE 2 SV 2
blastp_uniprot_sprot sp|Q38834|R13L4_ARATH 33 695 + 663 Gaps:143 85.45 852 28.57 4e-47 Disease resistance RPP13-like protein 4 OS Arabidopsis thaliana GN RPP13L4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FJB5|RP8L3_ARATH 1 807 + 807 Gaps:114 95.56 901 25.67 3e-40 Disease resistance RPP8-like protein 3 OS Arabidopsis thaliana GN RPP8L3 PE 2 SV 1
blastp_uniprot_sprot sp|P0C8S1|RP8L2_ARATH 1 841 + 841 Gaps:122 98.12 906 25.98 2e-38 Probable disease resistance RPP8-like protein 2 OS Arabidopsis thaliana GN RPP8L2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8W3K3|DRL8_ARATH 33 823 + 791 Gaps:144 94.62 910 25.67 2e-37 Putative disease resistance protein At1g58400 OS Arabidopsis thaliana GN At1g58400 PE 3 SV 1
rpsblast_cdd gnl|CDD|201512 161 428 + 268 Gaps:31 98.60 285 37.37 2e-53 pfam00931 NB-ARC NB-ARC domain.
rpsblast_kog gnl|CDD|39857 31 1151 + 1121 Gaps:169 94.71 889 31.12 2e-75 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35693 530 729 + 200 Gaps:24 36.46 565 29.13 7e-09 KOG0472 KOG0472 KOG0472 Leucine-rich repeat protein [Function unknown].
rpsblast_kog gnl|CDD|35752 477 630 + 154 Gaps:40 25.21 722 41.21 5e-08 KOG0532 KOG0532 KOG0532 Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton].
rpsblast_kog gnl|CDD|35838 520 729 + 210 Gaps:40 20.35 1081 23.64 4e-07 KOG0618 KOG0618 KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms].

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 538 798 261 PTHR23155 none none none
PANTHER 1 438 438 PTHR23155 none none none
PANTHER 1171 1214 44 PTHR23155 none none none
SUPERFAMILY 895 1215 321 SSF52058 none none none
Pfam 590 611 22 PF00560 none Leucine Rich Repeat IPR001611
PANTHER 1027 1119 93 PTHR23155 none none none
PANTHER 1 438 438 PTHR23155:SF419 none none none
Gene3D 901 1213 313 G3DSA:3.80.10.10 none none none
PRINTS 184 199 16 PR00364 none Disease resistance protein signature none
PRINTS 337 351 15 PR00364 none Disease resistance protein signature none
PRINTS 953 969 17 PR00364 none Disease resistance protein signature none
Gene3D 678 791 114 G3DSA:3.80.10.10 none none none
Gene3D 506 615 110 G3DSA:3.80.10.10 none none none
SUPERFAMILY 142 403 262 SSF52540 none none IPR027417
PANTHER 1027 1119 93 PTHR23155:SF419 none none none
SUPERFAMILY 461 800 340 SSF52058 none none none
Gene3D 174 284 111 G3DSA:3.40.50.300 none none IPR027417
PANTHER 538 798 261 PTHR23155:SF419 none none none
PANTHER 1171 1214 44 PTHR23155:SF419 none none none
Coils 33 54 22 Coil none none none
Pfam 162 429 268 PF00931 none NB-ARC domain IPR002182
Pfam 545 578 34 PF12799 none Leucine Rich repeats (2 copies) IPR025875

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 19   Secretory pathway 2 0.750 0.129 NON-PLANT 19