Protein : Qrob_P0022070.2 Q. robur
Protein Identifier  ? Qrob_P0022070.2 Organism . Name  Quercus robur
Protein Description  (M=14) KOG0472//KOG0532//KOG0617//KOG0618//KOG4658 - Leucine-rich repeat protein [Function unknown]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms]. Alias (in v1)  Qrob_P0182430.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 1191  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0043531 ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100852516 1 1150 + 1150 Gaps:133 97.80 1273 47.23 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|vvi:100260309 22 1170 + 1149 Gaps:128 98.89 1257 46.18 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|tcc:TCM_040705 1 1157 + 1157 Gaps:114 96.56 1279 45.51 0.0 LRR and NB-ARC domains-containing disease resistance protein putative
blastp_kegg lcl|vvi:100261714 1 1155 + 1155 Gaps:133 94.64 1325 45.45 0.0 putative disease resistance RPP13-like protein 1
blastp_kegg lcl|vvi:100258415 1 1155 + 1155 Gaps:144 98.19 1274 46.20 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|vvi:100244934 1 1150 + 1150 Gaps:167 98.55 1308 43.99 0.0 putative disease resistance RPP13-like protein 1
blastp_kegg lcl|mtr:MTR_4g043230 11 1157 + 1147 Gaps:92 96.02 1155 48.96 0.0 hypothetical protein
blastp_kegg lcl|vvi:100242853 7 1155 + 1149 Gaps:145 84.14 1469 46.52 0.0 putative disease resistance RPP13-like protein 1-like
blastp_kegg lcl|vvi:100253206 1 1155 + 1155 Gaps:106 88.68 1325 47.40 0.0 putative disease resistance protein At3g14460-like
blastp_kegg lcl|pper:PRUPE_ppa000343mg 5 1165 + 1161 Gaps:130 98.66 1266 43.47 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q9LRR4|R13L1_ARATH 6 1053 + 1048 Gaps:95 95.54 1054 49.65 0.0 Putative disease resistance RPP13-like protein 1 OS Arabidopsis thaliana GN RPPL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LRR5|DRL21_ARATH 39 1152 + 1114 Gaps:142 88.83 1424 41.19 0.0 Putative disease resistance protein At3g14460 OS Arabidopsis thaliana GN At3g14460 PE 3 SV 1
blastp_uniprot_sprot sp|Q7XA40|RGA3_SOLBU 41 1037 + 997 Gaps:74 95.26 992 36.72 5e-162 Putative disease resistance protein RGA3 OS Solanum bulbocastanum GN RGA3 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XA39|RGA4_SOLBU 6 1030 + 1025 Gaps:104 97.67 988 37.72 2e-160 Putative disease resistance protein RGA4 OS Solanum bulbocastanum GN RGA4 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XBQ9|RGA2_SOLBU 6 1037 + 1032 Gaps:107 98.25 970 37.46 8e-159 Disease resistance protein RGA2 OS Solanum bulbocastanum GN RGA2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XA42|RGA1_SOLBU 6 1005 + 1000 Gaps:89 95.30 979 38.05 8e-156 Putative disease resistance protein RGA1 OS Solanum bulbocastanum GN RGA1 PE 2 SV 2
blastp_uniprot_sprot sp|Q38834|R13L4_ARATH 10 782 + 773 Gaps:71 88.97 852 30.74 2e-68 Disease resistance RPP13-like protein 4 OS Arabidopsis thaliana GN RPP13L4 PE 2 SV 2
blastp_uniprot_sprot sp|Q39214|RPM1_ARATH 176 946 + 771 Gaps:90 81.75 926 29.19 3e-61 Disease resistance protein RPM1 OS Arabidopsis thaliana GN RPM1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8W474|DRL7_ARATH 44 936 + 893 Gaps:96 96.03 907 28.24 3e-56 Probable disease resistance protein At1g58390 OS Arabidopsis thaliana GN At1g58390 PE 2 SV 4
blastp_uniprot_sprot sp|Q9M667|RPP13_ARATH 41 715 + 675 Gaps:87 78.32 835 34.71 1e-55 Disease resistance protein RPP13 OS Arabidopsis thaliana GN RPP13 PE 2 SV 2
rpsblast_cdd gnl|CDD|201512 182 464 + 283 Gaps:12 98.60 285 42.70 9e-70 pfam00931 NB-ARC NB-ARC domain.
rpsblast_cdd gnl|CDD|178749 198 1150 + 953 Gaps:87 42.84 1153 29.35 5e-10 PLN03210 PLN03210 Resistant to P. syringae 6 Provisional.
rpsblast_kog gnl|CDD|39857 8 893 + 886 Gaps:88 95.61 889 29.76 1e-109 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35838 580 1013 + 434 Gaps:98 44.96 1081 23.66 5e-15 KOG0618 KOG0618 KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35752 520 686 + 167 Gaps:10 22.02 722 30.82 2e-12 KOG0532 KOG0532 KOG0532 Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton].
rpsblast_kog gnl|CDD|35693 583 713 + 131 Gaps:6 33.63 565 36.84 2e-09 KOG0472 KOG0472 KOG0472 Leucine-rich repeat protein [Function unknown].
rpsblast_kog gnl|CDD|35837 586 714 + 129 Gaps:3 48.48 264 29.69 2e-08 KOG0617 KOG0617 KOG0617 Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms].

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 183 466 284 PF00931 none NB-ARC domain IPR002182
Phobius 1 8 8 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 939 1154 216 SSF52047 none none none
SUPERFAMILY 167 439 273 SSF52540 none none IPR027417
Gene3D 845 1072 228 G3DSA:3.80.10.10 none none none
PANTHER 582 901 320 PTHR23155 none none none
Gene3D 754 818 65 G3DSA:3.80.10.10 none none none
Gene3D 705 718 14 G3DSA:3.80.10.10 none none none
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 751 833 83 SSF52058 none none none
SUPERFAMILY 500 714 215 SSF52058 none none none
SUPERFAMILY 869 999 131 SSF52058 none none none
PANTHER 6 474 469 PTHR23155 none none none
PANTHER 977 1103 127 PTHR23155 none none none
Gene3D 581 704 124 G3DSA:3.80.10.10 none none none
Phobius 20 23 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PRINTS 376 390 15 PR00364 none Disease resistance protein signature none
PRINTS 937 953 17 PR00364 none Disease resistance protein signature none
PRINTS 206 221 16 PR00364 none Disease resistance protein signature none
PRINTS 279 293 15 PR00364 none Disease resistance protein signature none
Phobius 24 1190 1167 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 181 356 176 G3DSA:3.40.50.300 none none IPR027417
SMART 656 679 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
SMART 609 632 24 SM00369 none Leucine-rich repeats, typical (most populated) subfamily IPR003591
Phobius 9 19 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 6 474 469 PTHR23155:SF419 none none none
PANTHER 977 1103 127 PTHR23155:SF419 none none none
PANTHER 582 901 320 PTHR23155:SF419 none none none

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 3 0.788 0.069 NON-PLANT 23