Protein : Qrob_P0021920.2 Q. robur
Protein Identifier  ? Qrob_P0021920.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR10438//PTHR10438:SF257 - THIOREDOXIN // SUBFAMILY NOT NAMED Alias (in v1)  Qrob_P1085100.1
Code Enzyme  EC:1.8.1.8 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 189  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103330855 1 188 + 188 Gaps:12 100.00 192 70.83 2e-88 thioredoxin-like protein CITRX chloroplastic
blastp_kegg lcl|tcc:TCM_045045 1 188 + 188 Gaps:17 100.00 173 77.46 4e-88 Thioredoxin z P TRX z isoform 1
blastp_kegg lcl|vvi:100254862 1 188 + 188 Gaps:6 100.00 184 72.28 8e-88 thioredoxin-like protein CITRX chloroplastic
blastp_kegg lcl|pop:POPTR_0001s06590g 1 188 + 188 Gaps:9 100.00 185 71.89 4e-87 POPTRDRAFT_1065742 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa025102mg 1 188 + 188 Gaps:12 100.00 192 70.31 5e-87 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10002629mg 26 188 + 163 Gaps:6 91.76 182 74.85 5e-86 hypothetical protein
blastp_kegg lcl|cit:102630583 26 188 + 163 Gaps:6 91.76 182 74.85 5e-86 thioredoxin-like protein CITRX chloroplastic-like
blastp_kegg lcl|gmx:100500580 1 188 + 188 Gaps:16 100.00 194 69.59 1e-84 uncharacterized LOC100500580
blastp_kegg lcl|pvu:PHAVU_005G025600g 1 188 + 188 Gaps:13 100.00 185 72.97 5e-84 hypothetical protein
blastp_kegg lcl|cam:101490287 1 188 + 188 Gaps:22 100.00 178 76.40 6e-84 thioredoxin-like protein CITRX chloroplastic-like
blastp_pdb 3hyp_B 101 188 + 88 Gaps:10 60.99 141 44.19 2e-16 mol:protein length:141 Thioredoxin
blastp_pdb 3hyp_A 101 188 + 88 Gaps:10 60.99 141 44.19 2e-16 mol:protein length:141 Thioredoxin
blastp_pdb 3hxs_B 101 174 + 74 Gaps:4 55.32 141 43.59 2e-15 mol:protein length:141 Thioredoxin
blastp_pdb 3hxs_A 101 174 + 74 Gaps:4 55.32 141 43.59 2e-15 mol:protein length:141 Thioredoxin
blastp_pdb 2l5l_A 77 188 + 112 Gaps:2 80.88 136 35.45 5e-15 mol:protein length:136 Thioredoxin
blastp_pdb 1gl8_A 97 188 + 92 Gaps:2 86.54 104 36.67 2e-14 mol:protein length:104 THIOREDOXIN
blastp_pdb 1fb6_B 97 188 + 92 Gaps:2 85.71 105 36.67 3e-14 mol:protein length:105 THIOREDOXIN M
blastp_pdb 1fb6_A 97 188 + 92 Gaps:2 85.71 105 36.67 3e-14 mol:protein length:105 THIOREDOXIN M
blastp_pdb 1fb0_B 97 188 + 92 Gaps:2 85.71 105 36.67 3e-14 mol:protein length:105 THIOREDOXIN M
blastp_pdb 1fb0_A 97 188 + 92 Gaps:2 85.71 105 36.67 3e-14 mol:protein length:105 THIOREDOXIN M
blastp_uniprot_sprot sp|Q9M7X9|CITRX_ARATH 1 188 + 188 Gaps:7 100.00 183 69.40 5e-81 Thioredoxin-like protein CITRX chloroplastic OS Arabidopsis thaliana GN At3g06730 PE 1 SV 1
blastp_uniprot_sprot sp|Q8H2V6|CITRX_ORYSJ 70 188 + 119 none 62.96 189 71.43 1e-61 Thioredoxin-like protein CITRX chloroplastic OS Oryza sativa subsp. japonica GN Os08g0378900 PE 2 SV 1
blastp_uniprot_sprot sp|Q7M1B9|THIO_CHLAA 101 188 + 88 Gaps:2 78.18 110 41.86 2e-16 Thioredoxin OS Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN trxA PE 1 SV 3
blastp_uniprot_sprot sp|O51088|THIO_BORBU 77 163 + 87 Gaps:3 73.50 117 43.02 9e-15 Thioredoxin OS Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN trxA PE 3 SV 1
blastp_uniprot_sprot sp|P07591|TRXM_SPIOL 97 188 + 92 Gaps:2 49.72 181 36.67 3e-14 Thioredoxin M-type chloroplastic OS Spinacia oleracea PE 1 SV 2
blastp_uniprot_sprot sp|Q8KEA4|THIO1_CHLTE 87 181 + 95 Gaps:3 91.09 101 38.04 4e-14 Thioredoxin-1 OS Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN trx1 PE 3 SV 1
blastp_uniprot_sprot sp|P0A616|THIO_MYCTU 101 185 + 85 Gaps:3 72.41 116 38.10 8e-13 Thioredoxin OS Mycobacterium tuberculosis GN trxA PE 1 SV 2
blastp_uniprot_sprot sp|P0A617|THIO_MYCBO 101 185 + 85 Gaps:3 72.41 116 38.10 8e-13 Thioredoxin OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN trxA PE 3 SV 2
blastp_uniprot_sprot sp|P08058|THIO_RHOSH 100 159 + 60 none 56.60 106 46.67 9e-13 Thioredoxin OS Rhodobacter sphaeroides GN trxA PE 1 SV 3
blastp_uniprot_sprot sp|Q9ZP20|TRXM5_ORYSJ 100 186 + 87 Gaps:2 49.42 172 34.12 2e-12 Thioredoxin M5 chloroplastic OS Oryza sativa subsp. japonica GN TRXM PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 82 186 105 G3DSA:3.40.30.10 none none IPR012336
Pfam 82 167 86 PF00085 none Thioredoxin IPR013766
PANTHER 56 188 133 PTHR10438 none none IPR005746
SUPERFAMILY 81 186 106 SSF52833 none none IPR012336
PANTHER 56 188 133 PTHR10438:SF257 none none none
PRINTS 150 161 12 PR00421 none Thioredoxin family signature none
PRINTS 110 119 10 PR00421 none Thioredoxin family signature none
PRINTS 102 110 9 PR00421 none Thioredoxin family signature none
ProSiteProfiles 48 188 141 PS51352 none Thioredoxin domain profile. IPR012336

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting