Protein : Qrob_P0021330.2 Q. robur
Protein Identifier  ? Qrob_P0021330.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=29) PF04578//PF13968 - Protein of unknown function, DUF594 // Domain of unknown function (DUF4220) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 783  
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0 Synonyms

0 GO Terms

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa026837mg 16 781 + 766 Gaps:110 98.78 735 55.10 0.0 hypothetical protein
blastp_kegg lcl|mdm:103405164 22 781 + 760 Gaps:129 98.65 739 40.60 1e-133 uncharacterized LOC103405164
blastp_kegg lcl|tcc:TCM_016622 22 781 + 760 Gaps:134 98.75 800 37.47 3e-131 hypothetical protein
blastp_kegg lcl|brp:103853644 17 781 + 765 Gaps:113 99.76 822 35.85 5e-127 uncharacterized LOC103853644
blastp_kegg lcl|rcu:RCOM_0519540 22 781 + 760 Gaps:94 99.09 769 36.48 2e-126 hypothetical protein
blastp_kegg lcl|tcc:TCM_016663 17 781 + 765 Gaps:149 99.74 778 37.63 5e-122 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_494430 19 781 + 763 Gaps:110 99.62 798 35.35 4e-118 hypothetical protein
blastp_kegg lcl|pxb:103939247 1 781 + 781 Gaps:80 96.86 701 51.69 3e-117 uncharacterized LOC103939247
blastp_kegg lcl|brp:103827792 19 781 + 763 Gaps:141 99.63 807 35.07 6e-117 uncharacterized LOC103827792
blastp_kegg lcl|pper:PRUPE_ppa015371mg 19 781 + 763 Gaps:66 96.52 690 53.15 1e-115 hypothetical protein
rpsblast_cdd gnl|CDD|206138 67 374 + 308 Gaps:38 87.29 362 44.62 8e-83 pfam13968 DUF4220 Domain of unknown function (DUF4220). This family is found in plants and is often associated with DUF294 pfam04578.
rpsblast_cdd gnl|CDD|191035 729 764 + 36 none 61.02 59 58.33 3e-11 pfam04578 DUF594 Protein of unknown function DUF594.

27 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 365 646 282 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 86 113 28 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 343 364 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 65 85 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 332 342 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 2 12 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 34 53 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 141 159 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 160 164 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 4 381 378 PTHR31325 none none none
PANTHER 469 770 302 PTHR31325 none none none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 730 764 35 PF04578 none Protein of unknown function, DUF594 IPR007658
Phobius 669 782 114 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 135 140 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 647 668 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 13 18 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 165 183 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 312 331 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 54 64 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 67 391 325 PF13968 none Domain of unknown function (DUF4220) IPR025315
PANTHER 4 381 378 PTHR31325:SF0 none none none
PANTHER 469 770 302 PTHR31325:SF0 none none none
Phobius 114 134 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 19 33 15 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 184 311 128 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

8 Localization

Analysis Start End Length
TMHMM 65 84 19
TMHMM 140 162 22
TMHMM 113 135 22
TMHMM 310 332 22
TMHMM 31 53 22
TMHMM 342 364 22
TMHMM 647 669 22
TMHMM 166 183 17

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 18   Secretory pathway 2 0.959 0.044 NON-PLANT 18